RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SART3Q15020 963 aaKnown RBP18.1■□□□□ 0.49
BRD9-208ENST00000489816 SAFBQ15424 915 aaKnown RBP eCLIP18.1■□□□□ 0.49
BRD9-208ENST00000489816 ZNF654Q8IZM8 581 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 PRR29P0C7W0 189 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 SGMS1Q86VZ5 419 aa18.1■□□□□ 0.49
BRD9-208ENST00000489816 TICAM2Q86XR7 235 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 FANCBQ8NB91 859 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 NUP98P52948 1817 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 TNKSO95271 1327 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 MAGEB6P1A0A0J9YX57 407 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 EARS2Q5JPH6 523 aaKnown RBP18.09■□□□□ 0.49
BRD9-208ENST00000489816 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 KRT23Q9C075 422 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 V9GY48 417 aaPredicted RBP18.09■□□□□ 0.49
BRD9-208ENST00000489816 ABCC12Q96J65 1359 aa18.09■□□□□ 0.49
BRD9-208ENST00000489816 BMP6P22004 513 aa18.08■□□□□ 0.49
BRD9-208ENST00000489816 GTF2F1P35269 517 aaKnown RBP eCLIP18.08■□□□□ 0.494e-8■■■■□ 20.6
BRD9-208ENST00000489816 UBASH3AP57075 661 aa18.08■□□□□ 0.49
BRD9-208ENST00000489816 JMYQ8N9B5 988 aa18.08■□□□□ 0.49
BRD9-208ENST00000489816 SERTAD1Q9UHV2 236 aa18.08■□□□□ 0.49
BRD9-208ENST00000489816 PAPPAQ13219 1627 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 PLEKHA8P1O95397 391 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 FMNL1O95466 1100 aaPredicted RBP18.08■□□□□ 0.48
BRD9-208ENST00000489816 SFPQP23246 707 aaKnown RBP eCLIP18.08■□□□□ 0.48
BRD9-208ENST00000489816 CDC25BP30305 580 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 LIFRP42702 1097 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 AFMP43652 599 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 FAM98CQ17RN3 349 aaKnown RBP18.08■□□□□ 0.48
BRD9-208ENST00000489816 KLHL10Q6JEL2 608 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 MAP7D2Q96T17 732 aa18.08■□□□□ 0.48
BRD9-208ENST00000489816 SRP68Q9UHB9 627 aaKnown RBP18.08■□□□□ 0.48
BRD9-208ENST00000489816 ANKRD18AQ8IVF6 992 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 HSD3B7Q9H2F3 369 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 AATFQ9NY61 560 aaKnown RBP eCLIP18.07■□□□□ 0.482e-7■■■■■ 46.1
BRD9-208ENST00000489816 TAF1P21675 1872 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 WNT7AO00755 349 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 MMP1P03956 469 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 VEGFAP15692 232 aaPredicted RBP18.07■□□□□ 0.48
BRD9-208ENST00000489816 IFNAR1P17181 557 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 NCBP1Q09161 790 aaKnown RBP18.07■□□□□ 0.48
BRD9-208ENST00000489816 CCAR2Q8N163 923 aaKnown RBP18.07■□□□□ 0.48
BRD9-208ENST00000489816 CRACR2BQ8N4Y2 399 aaPredicted RBP18.07■□□□□ 0.48
BRD9-208ENST00000489816 ZNF215Q9UL58 517 aaPredicted RBP18.07■□□□□ 0.48
BRD9-208ENST00000489816 MYH7P12883 1935 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 USP17L12C9JPN9 530 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 USP17L21D6R901 530 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 KRBA2Q6ZNG9 492 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 KRI1Q8N9T8 703 aaKnown RBP18.07■□□□□ 0.48
BRD9-208ENST00000489816 SHISA4Q96DD7 197 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 CNNM2Q9H8M5 875 aa18.07■□□□□ 0.48
BRD9-208ENST00000489816 AKAP17AQ02040 695 aaKnown RBP18.06■□□□□ 0.48
BRD9-208ENST00000489816 E4F1Q66K89 784 aaPredicted RBP18.06■□□□□ 0.48
BRD9-208ENST00000489816 CREBRFQ8IUR6 639 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 MYH15Q9Y2K3 1946 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 RBM6P78332 1123 aaKnown RBP18.06■□□□□ 0.48
BRD9-208ENST00000489816 ALX1Q15699 326 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 RESP18Q5W5W9 173 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 EPSTI1Q96J88 318 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 HPSEQ9Y251 543 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 WDR19Q8NEZ3 1342 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 SPEF2Q9C093 1822 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 COL4A1P02462 1669 aa18.06■□□□□ 0.48
BRD9-208ENST00000489816 CYP2D6P10635 497 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 STX17P56962 302 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 TPM4P67936 248 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 SYT10Q6XYQ8 523 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 HOMER1Q86YM7 354 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 CDK11BP21127 795 aaKnown RBP18.05■□□□□ 0.48
BRD9-208ENST00000489816 ZNF384Q8TF68 577 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 DHX58Q96C10 678 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 SMTNL1A8MU46 457 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 PPP6R2O75170 966 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 OLFM4Q6UX06 510 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 SMYD4Q8IYR2 804 aaPredicted RBP18.05■□□□□ 0.48
BRD9-208ENST00000489816 ENAHQ8N8S7 591 aaPredicted RBP18.05■□□□□ 0.48
BRD9-208ENST00000489816 STAG1Q8WVM7 1258 aa18.05■□□□□ 0.48
BRD9-208ENST00000489816 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.04■□□□□ 0.48
BRD9-208ENST00000489816 PRDX5P30044 214 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 ZNF174Q15697 407 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 CDC5LQ99459 802 aaKnown RBP18.04■□□□□ 0.48
BRD9-208ENST00000489816 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
BRD9-208ENST00000489816 CSRNP2Q9H175 543 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 MINPP1Q9UNW1 487 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 MYL5Q02045 173 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 FMR1Q06787 632 aaKnown RBP eCLIP18.04■□□□□ 0.48
BRD9-208ENST00000489816 TBC1D9BQ66K14 1250 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 TXNRD3Q86VQ6 643 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 LRRN4CLQ8ND94 238 aa18.04■□□□□ 0.48
BRD9-208ENST00000489816 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 CAVIN4Q5BKX8 364 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 IFIT1BQ5T764 474 aaKnown RBP18.03■□□□□ 0.48
BRD9-208ENST00000489816 LINC00116Q8NCU8 138 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 ESR2Q92731 530 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 FAM84BQ96KN1 310 aaPredicted RBP18.03■□□□□ 0.48
BRD9-208ENST00000489816 DISP2A7MBM2 1401 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 LRP6O75581 1613 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 ADAMTS3O15072 1205 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 CUTAO60888 179 aa18.03■□□□□ 0.48
BRD9-208ENST00000489816 CDC25AP30304 524 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms