RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 FAM20CQ8IXL6 584 aa9.04□□□□□ -0.96
VPS26A-206ENST00000489794 EZH1Q92800 747 aaPredicted RBP9.04□□□□□ -0.96
VPS26A-206ENST00000489794 SEC16BQ96JE7 1060 aa9.04□□□□□ -0.96
VPS26A-206ENST00000489794 WNT10AQ9GZT5 417 aa9.04□□□□□ -0.96
VPS26A-206ENST00000489794 FAM105AQ9NUU6 356 aa9.04□□□□□ -0.96
VPS26A-206ENST00000489794 PRR36Q9H6K5 1346 aa9.04□□□□□ -0.96
VPS26A-206ENST00000489794 PRAMEF27A3QJZ7 478 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 TLR3O15455 904 aaKnown RBP9.03□□□□□ -0.96
VPS26A-206ENST00000489794 IMPDH2P12268 514 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 TTLL4Q14679 1199 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 SEZ6Q53EL9 994 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 PPM1JQ5JR12 505 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 CDC37L1Q7L3B6 337 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 SMYD4Q8IYR2 804 aaPredicted RBP9.03□□□□□ -0.96
VPS26A-206ENST00000489794 TP53INP1Q96A56 240 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 TINF2Q9BSI4 451 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 ACSS3Q9H6R3 686 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 PCOLCE2Q9UKZ9 415 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 CSADQ9Y600 493 aa9.03□□□□□ -0.96
VPS26A-206ENST00000489794 RNGTTO60942 597 aaKnown RBP9.02□□□□□ -0.97
VPS26A-206ENST00000489794 ATE1O95260 518 aa9.02□□□□□ -0.97
VPS26A-206ENST00000489794 MAP4P27816 1152 aaKnown RBP9.02□□□□□ -0.97
VPS26A-206ENST00000489794 CRKP46108 304 aa9.02□□□□□ -0.97
VPS26A-206ENST00000489794 ETF1P62495 437 aaKnown RBP9.02□□□□□ -0.97
VPS26A-206ENST00000489794 CLEC10AQ8IUN9 316 aa9.02□□□□□ -0.97
VPS26A-206ENST00000489794 ARMC10Q8N2F6 343 aa9.02□□□□□ -0.97
VPS26A-206ENST00000489794 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
VPS26A-206ENST00000489794 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
VPS26A-206ENST00000489794 STRIP2Q9ULQ0 834 aa9.02□□□□□ -0.97
VPS26A-206ENST00000489794 RAB6AP20340 208 aa9.01□□□□□ -0.97
VPS26A-206ENST00000489794 RXRBP28702 533 aa9.01□□□□□ -0.97
VPS26A-206ENST00000489794 NAALADL2Q58DX5 795 aa9.01□□□□□ -0.97
VPS26A-206ENST00000489794 HID1Q8IV36 788 aa9.01□□□□□ -0.97
VPS26A-206ENST00000489794 EHMT1Q9H9B1 1298 aa9.01□□□□□ -0.97
VPS26A-206ENST00000489794 FAM95CA0A1B0GW59 222 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 HCLS1P14317 486 aaPredicted RBP9□□□□□ -0.97
VPS26A-206ENST00000489794 GRK4P32298 578 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 MCM4P33991 863 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 SOX9P48436 509 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 CDK8P49336 464 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 LRRFIP1Q32MZ4 808 aaKnown RBP9□□□□□ -0.97
VPS26A-206ENST00000489794 SGO2Q562F6 1265 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 PAOXQ6QHF9 649 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 KCNF1Q9H3M0 494 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 BRMS1Q9HCU9 246 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 RAXQ9Y2V3 346 aa9□□□□□ -0.97
VPS26A-206ENST00000489794 PGRP06401 933 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 H2AFB2P0C5Z0 115 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 CAP2P40123 477 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 TNNI2P48788 182 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 ARID5AQ03989 594 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 TMEM201Q5SNT2 666 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 CDPF1Q6NVV7 123 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 BEND4Q6ZU67 534 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.99□□□□□ -0.97
VPS26A-206ENST00000489794 FBLIM1Q8WUP2 373 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 ISL2Q96A47 359 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 FAM83CQ9BQN1 747 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 SEMA6CQ9H3T2 930 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 STOML1Q9UBI4 398 aa8.99□□□□□ -0.97
VPS26A-206ENST00000489794 POLR3KQ9Y2Y1 108 aaPredicted RBP8.99□□□□□ -0.97
VPS26A-206ENST00000489794 GSC2O15499 205 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 HTR3BO95264 441 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 NEFMP07197 916 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 ATF4P18848 351 aaPredicted RBP8.98□□□□□ -0.97
VPS26A-206ENST00000489794 PLCG1P19174 1290 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 NTF4P34130 210 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 YARSP54577 528 aaKnown RBP8.98□□□□□ -0.97
VPS26A-206ENST00000489794 PRR23CQ6ZRP0 262 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 SLC51AQ86UW1 340 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 GIMAP7Q8NHV1 300 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 GMLQ99445 158 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 TPSG1Q9NRR2 321 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 EFR3BQ9Y2G0 817 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 DAGLAQ9Y4D2 1042 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 PCDHB14Q9Y5E9 798 aa8.98□□□□□ -0.97
VPS26A-206ENST00000489794 NFICP08651 508 aa8.97□□□□□ -0.97
VPS26A-206ENST00000489794 SF3A1Q15459 793 aaKnown RBP8.97□□□□□ -0.97
VPS26A-206ENST00000489794 SLC6A19Q695T7 634 aa8.97□□□□□ -0.97
VPS26A-206ENST00000489794 MRPL41Q8IXM3 137 aaKnown RBP8.97□□□□□ -0.97
VPS26A-206ENST00000489794 FERD3LQ96RJ6 166 aa8.97□□□□□ -0.97
VPS26A-206ENST00000489794 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
VPS26A-206ENST00000489794 GRIN3BO60391 1043 aa8.96□□□□□ -0.98
VPS26A-206ENST00000489794 DOC2BQ14184 412 aa8.96□□□□□ -0.98
VPS26A-206ENST00000489794 GK5Q6ZS86 529 aa8.96□□□□□ -0.98
VPS26A-206ENST00000489794 MCATQ8IVS2 390 aaKnown RBP8.96□□□□□ -0.98
VPS26A-206ENST00000489794 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
VPS26A-206ENST00000489794 ZNRF3Q9ULT6 936 aa8.96□□□□□ -0.98
VPS26A-206ENST00000489794 LRIG2O94898 1065 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 NFKBIBQ15653 356 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 MFSD2AQ8NA29 543 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 OR6P1Q8NGX9 317 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 TMEM87BQ96K49 555 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 CRBNQ96SW2 442 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 GMIPQ9P107 970 aa8.95□□□□□ -0.98
VPS26A-206ENST00000489794 NASPP49321 788 aaPredicted RBP8.94□□□□□ -0.98
VPS26A-206ENST00000489794 CLCQ05315 142 aa8.94□□□□□ -0.98
VPS26A-206ENST00000489794 RBBP8NLQ8NC74 664 aaPredicted RBP8.94□□□□□ -0.98
VPS26A-206ENST00000489794 CPLX3Q8WVH0 158 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms