RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 SAGE1Q9NXZ1 904 aa19.01■□□□□ 0.63
LMX1A-204ENST00000489443 CTNND1O60716 968 aaKnown RBP19■□□□□ 0.63
LMX1A-204ENST00000489443 HLA-DOAP06340 250 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 GTF2A2P52657 109 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 PDE1AP54750 535 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 NUCB1Q02818 461 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 PPIL2Q13356 520 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 NOL9Q5SY16 702 aaKnown RBP19■□□□□ 0.63
LMX1A-204ENST00000489443 CHD1LQ86WJ1 897 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 SCYL3Q8IZE3 742 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 CRACR2BQ8N4Y2 399 aaPredicted RBP19■□□□□ 0.63
LMX1A-204ENST00000489443 MS4A4AQ96JQ5 239 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 TRIM34Q9BYJ4 488 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 STAP2Q9UGK3 403 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 HERC5Q9UII4 1024 aaKnown RBP19■□□□□ 0.63
LMX1A-204ENST00000489443 CASP8AP2Q9UKL3 1982 aa19■□□□□ 0.63
LMX1A-204ENST00000489443 IRF6O14896 467 aa18.99■□□□□ 0.63
LMX1A-204ENST00000489443 RNF113AO15541 343 aaKnown RBP18.99■□□□□ 0.63
LMX1A-204ENST00000489443 PPATQ06203 517 aa18.99■□□□□ 0.63
LMX1A-204ENST00000489443 IFNL1Q8IU54 200 aa18.99■□□□□ 0.63
LMX1A-204ENST00000489443 FOXP4Q8IVH2 680 aaPredicted RBP18.99■□□□□ 0.63
LMX1A-204ENST00000489443 SDR42E1Q8WUS8 393 aa18.99■□□□□ 0.63
LMX1A-204ENST00000489443 SIPA1L1O43166 1804 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 CCL15-CCL14A0A0B4J2E2 113 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 IGF2BP3O00425 579 aaKnown RBP eCLIP18.98■□□□□ 0.63
LMX1A-204ENST00000489443 PRKAB2O43741 272 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 TBC1D8O95759 1140 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 SNAPC2Q13487 334 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 CCL15Q16663 113 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 PTPN18Q99952 460 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 FSD1Q9BTV5 496 aa18.98■□□□□ 0.63
LMX1A-204ENST00000489443 PUS7LQ9H0K6 701 aaKnown RBP18.98■□□□□ 0.63
LMX1A-204ENST00000489443 LAMB1P07942 1786 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 TESPA1A2RU30 521 aaPredicted RBP18.97■□□□□ 0.63
LMX1A-204ENST00000489443 ALDH1A1P00352 501 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 POLR3DP05423 398 aaPredicted RBP18.97■□□□□ 0.63
LMX1A-204ENST00000489443 ZFYP08048 801 aaPredicted RBP18.97■□□□□ 0.63
LMX1A-204ENST00000489443 PTPRAP18433 802 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 LRRFIP1Q32MZ4 808 aaKnown RBP18.97■□□□□ 0.63
LMX1A-204ENST00000489443 OTUD7BQ6GQQ9 843 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 BRI3BPQ8WY22 251 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 MCM9Q9NXL9 1143 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 ZHX2Q9Y6X8 837 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 DOCK1Q14185 1865 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 NAV1Q8NEY1 1877 aa18.97■□□□□ 0.63
LMX1A-204ENST00000489443 CETPP11597 493 aa18.96■□□□□ 0.63
LMX1A-204ENST00000489443 RRP1BQ14684 758 aaKnown RBP18.96■□□□□ 0.63
LMX1A-204ENST00000489443 METTL16Q86W50 562 aaKnown RBP18.96■□□□□ 0.63
LMX1A-204ENST00000489443 DNAJC18Q9H819 358 aa18.96■□□□□ 0.63
LMX1A-204ENST00000489443 DCP1AQ9NPI6 582 aaPredicted RBP18.96■□□□□ 0.63
LMX1A-204ENST00000489443 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.96■□□□□ 0.63
LMX1A-204ENST00000489443 SLC4A4Q9Y6R1 1079 aa18.96■□□□□ 0.63
LMX1A-204ENST00000489443 CAP2P40123 477 aa18.95■□□□□ 0.62
LMX1A-204ENST00000489443 PLCD1P51178 756 aa18.95■□□□□ 0.62
LMX1A-204ENST00000489443 CCDC84Q86UT8 332 aaPredicted RBP18.95■□□□□ 0.62
LMX1A-204ENST00000489443 APPBP2Q92624 585 aa18.95■□□□□ 0.62
LMX1A-204ENST00000489443 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
LMX1A-204ENST00000489443 R3HDMLQ9H3Y0 253 aa18.95■□□□□ 0.62
LMX1A-204ENST00000489443 BAZ2AQ9UIF9 1905 aaKnown RBP18.94■□□□□ 0.62
LMX1A-204ENST00000489443 PLEKHM2Q8IWE5 1019 aa18.94■□□□□ 0.62
LMX1A-204ENST00000489443 ATP8A2Q9NTI2 1148 aa18.94■□□□□ 0.62
LMX1A-204ENST00000489443 SERPINB13Q9UIV8 391 aa18.94■□□□□ 0.62
LMX1A-204ENST00000489443 KCNH4Q9UQ05 1017 aa18.94■□□□□ 0.62
LMX1A-204ENST00000489443 ATAD5Q96QE3 1844 aa18.94■□□□□ 0.62
LMX1A-204ENST00000489443 GDF11O95390 407 aa18.93■□□□□ 0.62
LMX1A-204ENST00000489443 FAM43AQ8N2R8 423 aa18.93■□□□□ 0.62
LMX1A-204ENST00000489443 EVI5LQ96CN4 794 aa18.93■□□□□ 0.62
LMX1A-204ENST00000489443 DDRGK1Q96HY6 314 aa18.93■□□□□ 0.62
LMX1A-204ENST00000489443 STRBPQ96SI9 672 aaKnown RBP18.93■□□□□ 0.62
LMX1A-204ENST00000489443 EHD4Q9H223 541 aa18.93■□□□□ 0.62
LMX1A-204ENST00000489443 AFG3L2Q9Y4W6 797 aa18.93■□□□□ 0.62
LMX1A-204ENST00000489443 TRIM75PA6NK02 468 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 TRIM6-TRIM34B2RNG4 842 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 M0R2C6 588 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 CXCL11O14625 94 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 CYP2D6P10635 497 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 EVX2Q03828 476 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 TNS4Q8IZW8 715 aa18.92■□□□□ 0.62
LMX1A-204ENST00000489443 SEC62Q99442 399 aaKnown RBP18.92■□□□□ 0.62
LMX1A-204ENST00000489443 DDX60LQ5H9U9 1706 aaKnown RBP18.91■□□□□ 0.62
LMX1A-204ENST00000489443 PHIPQ8WWQ0 1821 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 BTBD19C9JJ37 291 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 GPR25O00155 361 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 GPAA1O43292 621 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 JAG1P78504 1218 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 CRHR2Q13324 411 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 SHROOM1Q2M3G4 852 aaPredicted RBP18.91■□□□□ 0.62
LMX1A-204ENST00000489443 AMOTL1Q8IY63 956 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 CFHR5Q9BXR6 569 aa18.91■□□□□ 0.62
LMX1A-204ENST00000489443 CYP2D7A0A087X1C5 515 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 USP17L5A8MUK1 530 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 USP17L12C9JPN9 530 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 USP17L21D6R901 530 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 ASNSP08243 561 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 SPP2Q13103 211 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 TAF1CQ15572 869 aaPredicted RBP18.9■□□□□ 0.62
LMX1A-204ENST00000489443 ZMYM1Q5SVZ6 1142 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 TATDN1Q6P1N9 297 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 ZNF296Q8WUU4 475 aaPredicted RBP18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms