RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 PHF20L1A8MW92 1017 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 IRF6O14896 467 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 CTNND1O60716 968 aaKnown RBP16.17■□□□□ 0.18
CCL28-202ENST00000489442 SLURP2P0DP57 97 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 CETPP11597 493 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 ADD2P35612 726 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 SCYL3Q8IZE3 742 aa16.17■□□□□ 0.18
CCL28-202ENST00000489442 TCRBV5S4A2TA0A5A2 114 aa16.16■□□□□ 0.18
CCL28-202ENST00000489442 IGF2BP3O00425 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCL28-202ENST00000489442 GLRX3O76003 335 aaKnown RBP16.16■□□□□ 0.18
CCL28-202ENST00000489442 MX1P20591 662 aa16.16■□□□□ 0.18
CCL28-202ENST00000489442 SLC4A8Q2Y0W8 1093 aa16.16■□□□□ 0.18
CCL28-202ENST00000489442 FOXP4Q8IVH2 680 aaPredicted RBP16.16■□□□□ 0.18
CCL28-202ENST00000489442 MS4A4AQ96JQ5 239 aa16.16■□□□□ 0.18
CCL28-202ENST00000489442 RIOK1Q9BRS2 568 aaKnown RBP16.16■□□□□ 0.18
CCL28-202ENST00000489442 DOCK1Q14185 1865 aa16.16■□□□□ 0.18
CCL28-202ENST00000489442 TESPA1A2RU30 521 aaPredicted RBP16.15■□□□□ 0.18
CCL28-202ENST00000489442 UBE3CQ15386 1083 aa16.15■□□□□ 0.18
CCL28-202ENST00000489442 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
CCL28-202ENST00000489442 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
CCL28-202ENST00000489442 TTC6Q86TZ1 520 aa16.15■□□□□ 0.18
CCL28-202ENST00000489442 OTUD7AQ8TE49 926 aaPredicted RBP16.15■□□□□ 0.18
CCL28-202ENST00000489442 BRI3BPQ8WY22 251 aa16.15■□□□□ 0.18
CCL28-202ENST00000489442 PTPN18Q99952 460 aa16.15■□□□□ 0.18
CCL28-202ENST00000489442 ZHX2Q9Y6X8 837 aa16.15■□□□□ 0.18
CCL28-202ENST00000489442 POLR3DP05423 398 aaPredicted RBP16.14■□□□□ 0.17
CCL28-202ENST00000489442 PTPRAP18433 802 aa16.14■□□□□ 0.17
CCL28-202ENST00000489442 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
CCL28-202ENST00000489442 KBTBD3Q8NAB2 608 aa16.14■□□□□ 0.17
CCL28-202ENST00000489442 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
CCL28-202ENST00000489442 ATAD5Q96QE3 1844 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 GPR25O00155 361 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 MBD4O95243 580 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 IGHDP01880 384 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 TAF1CQ15572 869 aaPredicted RBP16.13■□□□□ 0.17
CCL28-202ENST00000489442 LCORLQ8N3X6 602 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 DDRGK1Q96HY6 314 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 CFHR5Q9BXR6 569 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 LNPKQ9C0E8 428 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 MCM9Q9NXL9 1143 aa16.13■□□□□ 0.17
CCL28-202ENST00000489442 NAV1Q8NEY1 1877 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 CXCL11O14625 94 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 ZFYP08048 801 aaPredicted RBP16.12■□□□□ 0.17
CCL28-202ENST00000489442 CAP2P40123 477 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 SMC5Q8IY18 1101 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 SDR42E1Q8WUS8 393 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 ZNF296Q8WUU4 475 aaPredicted RBP16.12■□□□□ 0.17
CCL28-202ENST00000489442 ZFYVE28Q9HCC9 887 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 KCNH4Q9UQ05 1017 aa16.12■□□□□ 0.17
CCL28-202ENST00000489442 SIPA1L1O43166 1804 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 BAZ2AQ9UIF9 1905 aaKnown RBP16.11■□□□□ 0.17
CCL28-202ENST00000489442 RNF113AO15541 343 aaKnown RBP16.11■□□□□ 0.17
CCL28-202ENST00000489442 FKTNO75072 461 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 CRHR2Q13324 411 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 DGKZQ13574 1117 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 AMOTL1Q8IY63 956 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 FAM43AQ8N2R8 423 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 FSD1Q9BTV5 496 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 R3HDMLQ9H3Y0 253 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 SERPINB13Q9UIV8 391 aa16.11■□□□□ 0.17
CCL28-202ENST00000489442 TRIM75PA6NK02 468 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 BTBD19C9JJ37 291 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 CHGBP05060 677 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 ASNSP08243 561 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 PDE1AP54750 535 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 NOM1Q5C9Z4 860 aaKnown RBP16.1■□□□□ 0.17
CCL28-202ENST00000489442 GADL1Q6ZQY3 521 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 FASTKD5Q7L8L6 764 aaKnown RBP16.1■□□□□ 0.17
CCL28-202ENST00000489442 METTL16Q86W50 562 aaKnown RBP16.1■□□□□ 0.17
CCL28-202ENST00000489442 CHD1LQ86WJ1 897 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 PUS7LQ9H0K6 701 aaKnown RBP16.1■□□□□ 0.17
CCL28-202ENST00000489442 DCP1AQ9NPI6 582 aaPredicted RBP16.1■□□□□ 0.17
CCL28-202ENST00000489442 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.1■□□□□ 0.17
CCL28-202ENST00000489442 AFG3L2Q9Y4W6 797 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CCL28-202ENST00000489442 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 USP17L5A8MUK1 530 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 PRKAB2O43741 272 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 GDF11O95390 407 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 CCDC84Q86UT8 332 aaPredicted RBP16.09■□□□□ 0.17
CCL28-202ENST00000489442 APPBP2Q92624 585 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 TBC1D2Q9BYX2 928 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 EHD4Q9H223 541 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 DNAJC18Q9H819 358 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 AS3MTQ9HBK9 375 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 ZCCHC17Q9NP64 241 aaKnown RBP16.09■□□□□ 0.17
CCL28-202ENST00000489442 STAP2Q9UGK3 403 aa16.09■□□□□ 0.17
CCL28-202ENST00000489442 SALL3Q9BXA9 1300 aa16.08■□□□□ 0.17
CCL28-202ENST00000489442 PTPRFP10586 1907 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 MYH8P13535 1937 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 PDHXO00330 501 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 PLCD1P51178 756 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 NUCB1Q02818 461 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 SPP2Q13103 211 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 RRP1BQ14684 758 aaKnown RBP16.08■□□□□ 0.16
CCL28-202ENST00000489442 IFFO2Q5TF58 517 aa16.08■□□□□ 0.16
CCL28-202ENST00000489442 CTU1Q7Z7A3 348 aaKnown RBP16.08■□□□□ 0.16
CCL28-202ENST00000489442 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms