RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TACC3Q9Y6A5 838 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 BPTFQ12830 3046 aa10.06□□□□□ -0.8
EXOSC3-206ENST00000489414 MYL6BP14649 208 aa10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 RAG1P15918 1043 aa10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 ASTLQ6HA08 431 aaPredicted RBP10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 SMCR8Q8TEV9 937 aaPredicted RBP10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 LPAR1Q92633 364 aa10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 RRP7AQ9Y3A4 280 aaKnown RBP10.05□□□□□ -0.8
EXOSC3-206ENST00000489414 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 H0Y858 1186 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 RFXAPO00287 272 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 CLTBP09497 229 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 LEXMQ3ZCV2 418 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 TMEM240Q5SV17 173 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 C16orf59Q7L2K0 433 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 CERS5Q8N5B7 392 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 TLR9Q9NR96 1032 aa10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 MYBBP1AQ9BQG0 1328 aaKnown RBP10.04□□□□□ -0.8
EXOSC3-206ENST00000489414 ATMINO43313 823 aaPredicted RBP10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 CYP2B6P20813 491 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 GTF2IP78347 998 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 TLE2Q04725 743 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 LURAP1LQ8IV03 231 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 SUGP1Q8IWZ8 645 aaKnown RBP10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 PBXIP1Q96AQ6 731 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 ZNF70Q9UC06 446 aaPredicted RBP10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 PTPRFP10586 1907 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 FRYLO94915 3013 aa10.03□□□□□ -0.8
EXOSC3-206ENST00000489414 ZKSCAN1P17029 563 aaPredicted RBP10.02□□□□□ -0.81
EXOSC3-206ENST00000489414 IRS1P35568 1242 aa10.02□□□□□ -0.81
EXOSC3-206ENST00000489414 HERC4Q5GLZ8 1057 aaPredicted RBP10.02□□□□□ -0.81
EXOSC3-206ENST00000489414 TRMT44Q8IYL2 757 aaKnown RBP10.02□□□□□ -0.81
EXOSC3-206ENST00000489414 ZNF521Q96K83 1311 aa10.02□□□□□ -0.81
EXOSC3-206ENST00000489414 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 CXCL11O14625 94 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 ZIC2O95409 532 aaPredicted RBP10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 ZP2Q05996 745 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 PTCRAQ6ISU1 281 aaPredicted RBP10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 FASTKD5Q7L8L6 764 aaKnown RBP10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 TXNRD3Q86VQ6 643 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 GAS2L2Q8NHY3 880 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 SLC39A7Q92504 469 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 UBE2ZQ9H832 354 aaPredicted RBP10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 SEC31BQ9NQW1 1179 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 DLL3Q9NYJ7 618 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 DDX20Q9UHI6 824 aaKnown RBP10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 ZZEF1O43149 2961 aa10.01□□□□□ -0.81
EXOSC3-206ENST00000489414 SMG1Q96Q15 3661 aaKnown RBP10□□□□□ -0.81
EXOSC3-206ENST00000489414 A0A0G2JLL6 359 aaPredicted RBP10□□□□□ -0.81
EXOSC3-206ENST00000489414 TMEM221A6NGB7 291 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 EPOPA6NHQ4 379 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 TCP10L2B9ZVM9 353 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 F8W031 263 aaPredicted RBP10□□□□□ -0.81
EXOSC3-206ENST00000489414 M0R296 226 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 MSCO60682 206 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 C7P10643 843 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 SLC5A1P13866 664 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 INPP5BP32019 993 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 HSP90AB3PQ58FF7 597 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 EPHA10Q5JZY3 1008 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 GJC2Q5T442 439 aaPredicted RBP10□□□□□ -0.81
EXOSC3-206ENST00000489414 CCDC174Q6PII3 467 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 LRP10Q7Z4F1 713 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 PRRT2Q7Z6L0 340 aaPredicted RBP10□□□□□ -0.81
EXOSC3-206ENST00000489414 FBXL6Q8N531 539 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 EDAQ92838 391 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 NKD2Q969F2 451 aaPredicted RBP10□□□□□ -0.81
EXOSC3-206ENST00000489414 MUTYHQ9UIF7 546 aa10□□□□□ -0.81
EXOSC3-206ENST00000489414 CYSRT1A8MQ03 144 aa9.99□□□□□ -0.81
EXOSC3-206ENST00000489414 VCPP55072 806 aaKnown RBP9.99□□□□□ -0.81
EXOSC3-206ENST00000489414 SOCS4Q8WXH5 440 aa9.99□□□□□ -0.81
EXOSC3-206ENST00000489414 UPF3BQ9BZI7 483 aaKnown RBP9.99□□□□□ -0.81
EXOSC3-206ENST00000489414 TDRD3Q9H7E2 651 aaKnown RBP9.99□□□□□ -0.81
EXOSC3-206ENST00000489414 JAG2Q9Y219 1238 aa9.99□□□□□ -0.81
EXOSC3-206ENST00000489414 MYOGP15173 224 aa9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 TNNI2P48788 182 aa9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 RBM5P52756 815 aaKnown RBP eCLIP9.98□□□□□ -0.811e-14■■■■■ 51.6
EXOSC3-206ENST00000489414 PPIGQ13427 754 aaKnown RBP eCLIP9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 CCL14Q16627 93 aa9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 TRIM67Q6ZTA4 783 aa9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 NUDT12Q9BQG2 462 aa9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 COL4A4P53420 1690 aaPredicted RBP9.98□□□□□ -0.81
EXOSC3-206ENST00000489414 KBTBD13C9JR72 458 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 KCNA5P22460 613 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 RABGGTBP53611 331 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 PSRC1Q6PGN9 363 aaPredicted RBP9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 ZNF365Q70YC5 407 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 SLC44A5Q8NCS7 719 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 USP6NLQ92738 828 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 ZNF428Q96B54 188 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 FAM89AQ96GI7 184 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 PRKAG3Q9UGI9 489 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 PCDHA11Q9Y5I1 949 aa9.97□□□□□ -0.81
EXOSC3-206ENST00000489414 HELZ2Q9BYK8 2649 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms