RNA–Protein interactions for RNA: ENST00000489304.5

CD40-206, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 1,733 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-206ENST00000489304 TOMM22Q9NS69 142 aa21.2■□□□□ 0.98
CD40-206ENST00000489304 USP40Q9NVE5 1235 aa21.2■□□□□ 0.98
CD40-206ENST00000489304 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.2■□□□□ 0.98
CD40-206ENST00000489304 ORC4O43929 436 aa21.19■□□□□ 0.98
CD40-206ENST00000489304 CTDNEP1O95476 244 aa21.19■□□□□ 0.98
CD40-206ENST00000489304 CCT2P78371 535 aaKnown RBP21.19■□□□□ 0.98
CD40-206ENST00000489304 CXCL9Q07325 125 aa21.19■□□□□ 0.98
CD40-206ENST00000489304 TMEM67Q5HYA8 995 aa21.19■□□□□ 0.98
CD40-206ENST00000489304 CDC42EP5Q6NZY7 148 aa21.19■□□□□ 0.98
CD40-206ENST00000489304 NAP1L2Q9ULW6 460 aaPredicted RBP21.19■□□□□ 0.98
CD40-206ENST00000489304 GOLGA8BA8MQT2 603 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 IFIT3O14879 490 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 SLC3A2P08195 630 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 PTMSP20962 102 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 SART3Q15020 963 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 C12orf60Q5U649 245 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 GMLQ99445 158 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 SYT17Q9BSW7 474 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 NCOA5Q9HCD5 579 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 MTMR6Q9Y217 621 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 ECM29Q5VYK3 1845 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 LTBP3Q9NS15 1303 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 JAK2O60674 1132 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 RBM5P52756 815 aaKnown RBP eCLIP21.18■□□□□ 0.98
CD40-206ENST00000489304 HMGN5P82970 282 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 FOXD4L5Q5VV16 416 aaPredicted RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 LARP1BQ659C4 914 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 FOXD4L4Q8WXT5 416 aaPredicted RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 ZDHHC15Q96MV8 337 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 MRIQ9BWK5 157 aa21.18■□□□□ 0.98
CD40-206ENST00000489304 DDX4Q9NQI0 724 aaKnown RBP21.18■□□□□ 0.98
CD40-206ENST00000489304 FLT1P17948 1338 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 ROBO3Q96MS0 1386 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 GOLGA6L22H0YM25 854 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 DHX16O60231 1041 aaKnown RBP21.17■□□□□ 0.98
CD40-206ENST00000489304 PRDM1O75626 825 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 NT5C2P49902 561 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 APOA5Q6Q788 366 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 DYNLL2Q96FJ2 89 aa21.17■□□□□ 0.98
CD40-206ENST00000489304 TCHHQ07283 1943 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 WDHD1O75717 1129 aaPredicted RBP21.16■□□□□ 0.98
CD40-206ENST00000489304 PLCD1P51178 756 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 HDLBPQ00341 1268 aaKnown RBP21.16■□□□□ 0.98
CD40-206ENST00000489304 PICALMQ13492 652 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 TMTC2Q8N394 836 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 JDP2Q8WYK2 163 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 SENP2Q9HC62 589 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 ARFGEF1Q9Y6D6 1849 aa21.16■□□□□ 0.98
CD40-206ENST00000489304 PDE4BQ07343 736 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 CFAP100Q494V2 611 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 CIAPIN1Q6FI81 312 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 AMOTL1Q8IY63 956 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 SERPINA10Q9UK55 444 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 ERICH2A1L162 156 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 PTPDC1A2A3K4 754 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 F13A1P00488 732 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 CACNB3P54284 484 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 WTAPQ15007 396 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 NFXL1Q6ZNB6 911 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 ARHGAP27Q6ZUM4 889 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 ZKSCAN3Q9BRR0 538 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 KIF3AQ9Y496 699 aa21.15■□□□□ 0.98
CD40-206ENST00000489304 NID2Q14112 1375 aa21.14■□□□□ 0.98
CD40-206ENST00000489304 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
CD40-206ENST00000489304 NFIAQ12857 509 aa21.14■□□□□ 0.97
CD40-206ENST00000489304 SEC23AQ15436 765 aa21.14■□□□□ 0.97
CD40-206ENST00000489304 UBAC1Q9BSL1 405 aa21.14■□□□□ 0.97
CD40-206ENST00000489304 MYO3BQ8WXR4 1341 aa21.14■□□□□ 0.97
CD40-206ENST00000489304 GOLGB1Q14789 3259 aaKnown RBP21.13■□□□□ 0.97
CD40-206ENST00000489304 CCDC69A6NI79 296 aa21.13■□□□□ 0.97
CD40-206ENST00000489304 ZBTB43O43298 467 aa21.13■□□□□ 0.97
CD40-206ENST00000489304 RANBP6O60518 1105 aaKnown RBP21.13■□□□□ 0.97
CD40-206ENST00000489304 MCTP1Q6DN14 999 aa21.13■□□□□ 0.97
CD40-206ENST00000489304 PRMT6Q96LA8 375 aaPredicted RBP21.13■□□□□ 0.97
CD40-206ENST00000489304 SHTN1A0MZ66 631 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 VPS37CA5D8V6 355 aaPredicted RBP21.12■□□□□ 0.97
CD40-206ENST00000489304 METAP2P50579 478 aaKnown RBP eCLIP21.12■□□□□ 0.97
CD40-206ENST00000489304 RCAN1P53805 252 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 RAB11FIP4Q86YS3 637 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 ZFPM1Q8IX07 1006 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 FAM184AQ8NB25 1140 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 SLC44A5Q8NCS7 719 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 DDX11Q96FC9 970 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 ZSCAN10Q96SZ4 725 aaPredicted RBP21.12■□□□□ 0.97
CD40-206ENST00000489304 TDRD3Q9H7E2 651 aaKnown RBP21.12■□□□□ 0.97
CD40-206ENST00000489304 ATP6V1DQ9Y5K8 247 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 SLC12A7Q9Y666 1083 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 TNKSO95271 1327 aa21.12■□□□□ 0.97
CD40-206ENST00000489304 YBX3P16989 372 aaKnown RBP eCLIP21.11■□□□□ 0.97
CD40-206ENST00000489304 FAM47AQ5JRC9 791 aa21.11■□□□□ 0.97
CD40-206ENST00000489304 SYNE3Q6ZMZ3 975 aa21.11■□□□□ 0.97
CD40-206ENST00000489304 IQCA1Q86XH1 822 aa21.11■□□□□ 0.97
CD40-206ENST00000489304 AGBL3Q8NEM8 1001 aa21.11■□□□□ 0.97
CD40-206ENST00000489304 CPLX1O14810 134 aa21.1■□□□□ 0.97
CD40-206ENST00000489304 TRAK2O60296 914 aa21.1■□□□□ 0.97
CD40-206ENST00000489304 FDPSP14324 419 aaKnown RBP21.1■□□□□ 0.97
CD40-206ENST00000489304 ENAHQ8N8S7 591 aaPredicted RBP21.1■□□□□ 0.97
CD40-206ENST00000489304 OSBPL5Q9H0X9 879 aaPredicted RBP21.1■□□□□ 0.97
CD40-206ENST00000489304 GOLGA8AA7E2F4 631 aa21.09■□□□□ 0.97
CD40-206ENST00000489304 FZD9O00144 591 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms