RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 HDLBPQ00341 1268 aaKnown RBP6.8□□□□□ -1.32
XRN1-213ENST00000489241 ZNF252P-AS1Q0IIN9 211 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 ZC3H12AQ5D1E8 599 aaKnown RBP6.8□□□□□ -1.32
XRN1-213ENST00000489241 WFDC3Q8IUB2 231 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 NETO1Q8TDF5 533 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 NECAB3Q96P71 396 aaPredicted RBP6.8□□□□□ -1.32
XRN1-213ENST00000489241 PCOLCE2Q9UKZ9 415 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 SAMM50Q9Y512 469 aa6.8□□□□□ -1.32
XRN1-213ENST00000489241 CTSHP09668 335 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 ZC3H6P61129 1189 aaKnown RBP6.79□□□□□ -1.32
XRN1-213ENST00000489241 C9orf131Q5VYM1 1079 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 TPTE2Q6XPS3 522 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 ZNF574Q6ZN55 896 aaPredicted RBP6.79□□□□□ -1.32
XRN1-213ENST00000489241 SV2BQ7L1I2 683 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 FAM181AQ8N9Y4 354 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 RNF214Q8ND24 703 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 GPBAR1Q8TDU6 330 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 ISL2Q96A47 359 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 ACSBG1Q96GR2 724 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 CBX8Q9HC52 389 aa6.79□□□□□ -1.32
XRN1-213ENST00000489241 RLBP1P12271 317 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 YBX3P16989 372 aaKnown RBP eCLIP6.78□□□□□ -1.32
XRN1-213ENST00000489241 JUNBP17275 347 aaPredicted RBP6.78□□□□□ -1.32
XRN1-213ENST00000489241 PLCL1Q15111 1095 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 MEI1Q5TIA1 1274 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 PLD6Q8N2A8 252 aaKnown RBP6.78□□□□□ -1.32
XRN1-213ENST00000489241 ASIC4Q96FT7 647 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 DUSP23Q9BVJ7 150 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 MKNK2Q9HBH9 465 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 SSU72Q9NP77 194 aaKnown RBP6.78□□□□□ -1.32
XRN1-213ENST00000489241 CACNA2D2Q9NY47 1150 aa6.78□□□□□ -1.32
XRN1-213ENST00000489241 BTBD11A6QL63 1104 aa6.77□□□□□ -1.33
XRN1-213ENST00000489241 ENC1O14682 589 aa6.77□□□□□ -1.33
XRN1-213ENST00000489241 LEFTY1O75610 366 aa6.77□□□□□ -1.33
XRN1-213ENST00000489241 ERCC5P28715 1186 aaPredicted RBP6.77□□□□□ -1.33
XRN1-213ENST00000489241 CCDC85BQ15834 202 aaPredicted RBP6.77□□□□□ -1.33
XRN1-213ENST00000489241 METTL16Q86W50 562 aaKnown RBP6.77□□□□□ -1.33
XRN1-213ENST00000489241 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.77□□□□□ -1.33
XRN1-213ENST00000489241 TOP6BLQ8N6T0 577 aa6.77□□□□□ -1.33
XRN1-213ENST00000489241 NOC4LQ9BVI4 516 aaKnown RBP6.77□□□□□ -1.33
XRN1-213ENST00000489241 METTL5Q9NRN9 209 aaKnown RBP6.77□□□□□ -1.33
XRN1-213ENST00000489241 TRIM37O94972 964 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 CEACAM5P06731 702 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 RAD51AP2Q09MP3 1159 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 IFI16Q16666 785 aaKnown RBP6.76□□□□□ -1.33
XRN1-213ENST00000489241 NAALADL2Q58DX5 795 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 SPRED2Q7Z698 418 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 RELL1Q8IUW5 271 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
XRN1-213ENST00000489241 U3KQE9 123 aa6.76□□□□□ -1.33
XRN1-213ENST00000489241 FBXO24O75426 580 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 PAGE1O75459 146 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 OXCT1P55809 520 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 FANCCQ00597 558 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 PRKCQQ04759 706 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 ZNF792Q3KQV3 632 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 RNF34Q969K3 372 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 DRC1Q96MC2 740 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 VAV3Q9UKW4 847 aa6.75□□□□□ -1.33
XRN1-213ENST00000489241 LMNB1P20700 586 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 BMP6P22004 513 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 FUT4P22083 530 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 NTF4P34130 210 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 ZNF76P36508 570 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 BNIP3Q12983 259 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 PWP1Q13610 501 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 LRRC14Q15048 493 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 PPM1JQ5JR12 505 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 SCARA3Q6AZY7 606 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 LLGL2Q6P1M3 1020 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 MPRIPQ6WCQ1 1025 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 HS2ST1Q7LGA3 356 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 NT5DC4Q86YG4 428 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 GRIN3AQ8TCU5 1115 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 HRASLS5Q96KN8 279 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 CYP8B1Q9UNU6 501 aa6.74□□□□□ -1.33
XRN1-213ENST00000489241 TMEM265A0A087WTH1 108 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 PAPLNO95428 1278 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 CD8BP10966 210 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 OGFOD2Q6N063 350 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 RSRP1Q9BUV0 290 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 PICK1Q9NRD5 415 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 GGT7Q9UJ14 662 aa6.73□□□□□ -1.33
XRN1-213ENST00000489241 DCDC2CA8MYV0 355 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 BIN1O00499 593 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 FANCGO15287 622 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 CELA3AP09093 270 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 RING1Q06587 406 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 AOC3Q16853 763 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 ZBTB37Q5TC79 503 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 DIEXFQ68CQ4 756 aaKnown RBP6.72□□□□□ -1.33
XRN1-213ENST00000489241 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 TNKS2Q9H2K2 1166 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 PRDM10Q9NQV6 1147 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 GTF2IRD1Q9UHL9 959 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 PLAGL2Q9UPG8 496 aa6.72□□□□□ -1.33
XRN1-213ENST00000489241 CSADQ9Y600 493 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms