RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 ZMYND8Q9ULU4 1186 aaPredicted RBP14.18□□□□□ -0.14
USP11-210ENST00000489030 COL6A3P12111 3177 aa14.18□□□□□ -0.14
USP11-210ENST00000489030 DOCK1Q14185 1865 aa14.18□□□□□ -0.14
USP11-210ENST00000489030 SEMA3EO15041 775 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 UBTFL1P0CB47 393 aaPredicted RBP14.17□□□□□ -0.14
USP11-210ENST00000489030 TRIM27P14373 513 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 JAG1P78504 1218 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 MECOMQ03112 1051 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 SHROOM1Q2M3G4 852 aaPredicted RBP14.17□□□□□ -0.14
USP11-210ENST00000489030 TBC1D9Q6ZT07 1266 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 DZIP1Q86YF9 867 aaKnown RBP14.17□□□□□ -0.14
USP11-210ENST00000489030 FTSJ3Q8IY81 847 aaKnown RBP14.17□□□□□ -0.14
USP11-210ENST00000489030 SLC17A8Q8NDX2 589 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 FAM163AQ96GL9 167 aaPredicted RBP14.17□□□□□ -0.14
USP11-210ENST00000489030 MEIS3Q99687 375 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.17□□□□□ -0.14
USP11-210ENST00000489030 GJD2Q9UKL4 321 aa14.17□□□□□ -0.14
USP11-210ENST00000489030 MROH7-TTC4A0A0A0MT08 1334 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 GPR75-ASB3A0A0A6YYF3 556 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 DLL1O00548 723 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 IL15P40933 162 aaPredicted RBP14.16□□□□□ -0.14
USP11-210ENST00000489030 TFCP2Q12800 502 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 SPP2Q13103 211 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 C7orf61Q8IZ16 206 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 CLUAP1Q96AJ1 413 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 CUL9Q8IWT3 2517 aa14.16□□□□□ -0.14
USP11-210ENST00000489030 SYN1P17600 705 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 HMGCS2P54868 508 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 FAM110CQ1W6H9 321 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 Q7L0L9 218 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 XAGE2Q96GT9 111 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 GDF15Q99988 308 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.15□□□□□ -0.14
USP11-210ENST00000489030 COPRSQ9NQ92 184 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
USP11-210ENST00000489030 A0A1B0GUL7 405 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 ZBTB22O15209 634 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 TBC1D12O60347 775 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 POTEEQ6S8J3 1075 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 TRIB2Q92519 343 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 COA7Q96BR5 231 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 ASCC2Q9H1I8 757 aaPredicted RBP14.14□□□□□ -0.15
USP11-210ENST00000489030 HMG20BQ9P0W2 317 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 A0A0C4DFX4 3053 aa14.14□□□□□ -0.15
USP11-210ENST00000489030 PLXNB2O15031 1838 aa14.13□□□□□ -0.15
USP11-210ENST00000489030 CHMP4BQ9H444 224 aaKnown RBP14.13□□□□□ -0.15
USP11-210ENST00000489030 TXNRD2Q9NNW7 524 aa14.13□□□□□ -0.15
USP11-210ENST00000489030 TNNQ9UQP3 1299 aa14.13□□□□□ -0.15
USP11-210ENST00000489030 PDS5AQ29RF7 1337 aaKnown RBP14.13□□□□□ -0.15
USP11-210ENST00000489030 LOC285556D6RIA3 1793 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 A0A1W2PPC1 479 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 HMGCRP04035 888 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 ERICH6Q7L0X2 663 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 NECAB2Q7Z6G3 386 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 ZGPATQ8N5A5 531 aaKnown RBP14.12□□□□□ -0.15
USP11-210ENST00000489030 TMEM57Q8N5G2 664 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 PROCA1Q8NCQ7 364 aaPredicted RBP14.12□□□□□ -0.15
USP11-210ENST00000489030 ZNF280CQ8ND82 737 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 PANK1Q8TE04 598 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 SH3RF3Q8TEJ3 882 aaPredicted RBP14.12□□□□□ -0.15
USP11-210ENST00000489030 NSUN4Q96CB9 384 aaKnown RBP14.12□□□□□ -0.15
USP11-210ENST00000489030 OSBPL5Q9H0X9 879 aaPredicted RBP14.12□□□□□ -0.15
USP11-210ENST00000489030 DNAJC18Q9H819 358 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 PFASO15067 1338 aa14.12□□□□□ -0.15
USP11-210ENST00000489030 SIPA1L1O43166 1804 aa14.11□□□□□ -0.15
USP11-210ENST00000489030 NEFLP07196 543 aa14.11□□□□□ -0.15
USP11-210ENST00000489030 CYP2B6P20813 491 aa14.11□□□□□ -0.15
USP11-210ENST00000489030 CAP2P40123 477 aa14.11□□□□□ -0.15
USP11-210ENST00000489030 MAGEA10P43363 369 aaPredicted RBP14.11□□□□□ -0.15
USP11-210ENST00000489030 P2RX7Q99572 595 aaKnown RBP14.11□□□□□ -0.15
USP11-210ENST00000489030 DDX60LQ5H9U9 1706 aaKnown RBP14.1□□□□□ -0.15
USP11-210ENST00000489030 RLBP1P12271 317 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 MCAMP43121 646 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 MTMR2Q13614 643 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 MVPQ14764 893 aaKnown RBP14.1□□□□□ -0.15
USP11-210ENST00000489030 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 C20orf194Q5TEA3 1177 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 SPTY2D1Q68D10 685 aaPredicted RBP14.1□□□□□ -0.15
USP11-210ENST00000489030 ADGRA1Q86SQ6 560 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 SPATA5Q8NB90 893 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 NEUROD6Q96NK8 337 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 PNMA3Q9UL41 463 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 DDX19BQ9UMR2 479 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 COG6Q9Y2V7 657 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 RPTORQ8N122 1335 aa14.1□□□□□ -0.15
USP11-210ENST00000489030 USP17L5A8MUK1 530 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 SRGAP3O43295 1099 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
USP11-210ENST00000489030 BMP8BP34820 402 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 GCLCP48506 637 aaPredicted RBP14.09□□□□□ -0.15
USP11-210ENST00000489030 CCL14Q16627 93 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 Q3C1V9 767 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 MAP3K21Q5TCX8 1036 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 SLF2Q8IX21 1173 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 TEX11Q8IYF3 940 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 DEFB123Q8N688 67 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 C11orf49Q9H6J7 331 aa14.09□□□□□ -0.15
USP11-210ENST00000489030 HMX1Q9NP08 348 aaPredicted RBP14.09□□□□□ -0.15
USP11-210ENST00000489030 SNRKQ9NRH2 765 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms