RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 AATFQ9NY61 560 aaKnown RBP eCLIP22.42■■□□□ 1.18
ATG9A-222ENST00000488833 SRRDQ9UH36 339 aa22.42■■□□□ 1.18
ATG9A-222ENST00000488833 CDK5RAP2Q96SN8 1893 aa22.41■■□□□ 1.18
ATG9A-222ENST00000488833 BAG3O95817 575 aa22.41■■□□□ 1.18
ATG9A-222ENST00000488833 BCRP11274 1271 aa22.41■■□□□ 1.18
ATG9A-222ENST00000488833 OSBPP22059 807 aa22.41■■□□□ 1.18
ATG9A-222ENST00000488833 ZAP70P43403 619 aa22.41■■□□□ 1.18
ATG9A-222ENST00000488833 SLC4A8Q2Y0W8 1093 aa22.41■■□□□ 1.18
ATG9A-222ENST00000488833 ZNF512BQ96KM6 892 aaPredicted RBP22.41■■□□□ 1.18
ATG9A-222ENST00000488833 CCDC8Q9H0W5 538 aaPredicted RBP22.41■■□□□ 1.18
ATG9A-222ENST00000488833 PLCG2P16885 1265 aa22.4■■□□□ 1.18
ATG9A-222ENST00000488833 PIH1D3Q9NQM4 214 aaKnown RBP22.4■■□□□ 1.18
ATG9A-222ENST00000488833 SLC45A1Q9Y2W3 748 aa22.4■■□□□ 1.18
ATG9A-222ENST00000488833 MGAMO43451 1857 aa22.4■■□□□ 1.18
ATG9A-222ENST00000488833 SIPA1L1O43166 1804 aa22.4■■□□□ 1.18
ATG9A-222ENST00000488833 FOCADQ5VW36 1801 aa22.4■■□□□ 1.18
ATG9A-222ENST00000488833 MYPNQ86TC9 1320 aa22.39■■□□□ 1.18
ATG9A-222ENST00000488833 BRCA2P51587 3418 aa22.39■■□□□ 1.18
ATG9A-222ENST00000488833 HOXD10P28358 340 aa22.39■■□□□ 1.17
ATG9A-222ENST00000488833 ADGRA1Q86SQ6 560 aa22.39■■□□□ 1.17
ATG9A-222ENST00000488833 RAET1EQ8TD07 263 aa22.39■■□□□ 1.17
ATG9A-222ENST00000488833 EAF2Q96CJ1 260 aaPredicted RBP22.39■■□□□ 1.17
ATG9A-222ENST00000488833 EXOC6BQ9Y2D4 811 aa22.39■■□□□ 1.17
ATG9A-222ENST00000488833 FCGRTP55899 365 aa22.38■■□□□ 1.17
ATG9A-222ENST00000488833 MAPKAPK5Q8IW41 473 aa22.38■■□□□ 1.17
ATG9A-222ENST00000488833 SMCR8Q8TEV9 937 aaPredicted RBP22.38■■□□□ 1.17
ATG9A-222ENST00000488833 HERC5Q9UII4 1024 aaKnown RBP22.38■■□□□ 1.17
ATG9A-222ENST00000488833 AGTPBP1Q9UPW5 1226 aa22.38■■□□□ 1.17
ATG9A-222ENST00000488833 LOC285556D6RIA3 1793 aa22.38■■□□□ 1.17
ATG9A-222ENST00000488833 FLT1P17948 1338 aa22.37■■□□□ 1.17
ATG9A-222ENST00000488833 PPP4CP60510 307 aa22.37■■□□□ 1.17
ATG9A-222ENST00000488833 ERC1Q8IUD2 1116 aa22.37■■□□□ 1.17
ATG9A-222ENST00000488833 TGFBRAP1Q8WUH2 860 aa22.37■■□□□ 1.17
ATG9A-222ENST00000488833 CAP2P40123 477 aa22.36■■□□□ 1.17
ATG9A-222ENST00000488833 RRP1BQ14684 758 aaKnown RBP22.36■■□□□ 1.17
ATG9A-222ENST00000488833 TREML2Q5T2D2 321 aa22.36■■□□□ 1.17
ATG9A-222ENST00000488833 DHX36Q9H2U1 1008 aaKnown RBP22.36■■□□□ 1.17
ATG9A-222ENST00000488833 PI4KBQ9UBF8 816 aa22.36■■□□□ 1.17
ATG9A-222ENST00000488833 MKI67P46013 3256 aaKnown RBP22.35■■□□□ 1.17
ATG9A-222ENST00000488833 IGSF3O75054 1194 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 IDH1O75874 414 aaKnown RBP22.35■■□□□ 1.17
ATG9A-222ENST00000488833 MS4A1P11836 297 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 CYP7A1P22680 504 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 GRK4P32298 578 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 PRKCZQ05513 592 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 SPP2Q13103 211 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 AACSQ86V21 672 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 PROCA1Q8NCQ7 364 aaPredicted RBP22.35■■□□□ 1.17
ATG9A-222ENST00000488833 ZNF280CQ8ND82 737 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 TRIM34Q9BYJ4 488 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 TBC1D2Q9BYX2 928 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 PNMA3Q9UL41 463 aa22.35■■□□□ 1.17
ATG9A-222ENST00000488833 USP17L5A8MUK1 530 aa22.34■■□□□ 1.17
ATG9A-222ENST00000488833 HMGCS2P54868 508 aa22.34■■□□□ 1.17
ATG9A-222ENST00000488833 DYNLL1P63167 89 aaKnown RBP22.34■■□□□ 1.17
ATG9A-222ENST00000488833 NDUFB9Q9Y6M9 179 aa22.34■■□□□ 1.17
ATG9A-222ENST00000488833 MTFR1Q15390 333 aa22.33■■□□□ 1.17
ATG9A-222ENST00000488833 CRACR2BQ8N4Y2 399 aaPredicted RBP22.33■■□□□ 1.17
ATG9A-222ENST00000488833 AS3MTQ9HBK9 375 aa22.33■■□□□ 1.17
ATG9A-222ENST00000488833 BIN2Q9UBW5 565 aaPredicted RBP22.33■■□□□ 1.17
ATG9A-222ENST00000488833 SAP30BPQ9UHR5 308 aaKnown RBP22.33■■□□□ 1.17
ATG9A-222ENST00000488833 PALD1Q9ULE6 856 aa22.33■■□□□ 1.17
ATG9A-222ENST00000488833 MYH1P12882 1939 aa22.32■■□□□ 1.16
ATG9A-222ENST00000488833 HSP90AB4PQ58FF6 505 aa22.32■■□□□ 1.16
ATG9A-222ENST00000488833 MIGA1Q8NAN2 632 aa22.32■■□□□ 1.16
ATG9A-222ENST00000488833 DNAJC18Q9H819 358 aa22.32■■□□□ 1.16
ATG9A-222ENST00000488833 IL1RAPL2Q9NP60 686 aa22.32■■□□□ 1.16
ATG9A-222ENST00000488833 GABRQQ9UN88 632 aa22.32■■□□□ 1.16
ATG9A-222ENST00000488833 CEP290O15078 2479 aa22.31■■□□□ 1.16
ATG9A-222ENST00000488833 HLA-DOAP06340 250 aa22.31■■□□□ 1.16
ATG9A-222ENST00000488833 PABPC4Q13310 644 aaKnown RBP eCLIP22.31■■□□□ 1.16
ATG9A-222ENST00000488833 ANKRD13CQ8N6S4 541 aa22.31■■□□□ 1.16
ATG9A-222ENST00000488833 MAGEB6Q8N7X4 407 aa22.31■■□□□ 1.16
ATG9A-222ENST00000488833 TNPO2O14787 897 aaKnown RBP22.3■■□□□ 1.16
ATG9A-222ENST00000488833 ASNSP08243 561 aa22.3■■□□□ 1.16
ATG9A-222ENST00000488833 FOXP4Q8IVH2 680 aaPredicted RBP22.3■■□□□ 1.16
ATG9A-222ENST00000488833 SLAIN1Q8ND83 568 aa22.3■■□□□ 1.16
ATG9A-222ENST00000488833 RHPN1Q8TCX5 695 aa22.3■■□□□ 1.16
ATG9A-222ENST00000488833 ANTXR1Q9H6X2 564 aa22.3■■□□□ 1.16
ATG9A-222ENST00000488833 COG6Q9Y2V7 657 aa22.3■■□□□ 1.16
ATG9A-222ENST00000488833 APBB1O00213 710 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 GDF11O95390 407 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 UBXN2AP68543 259 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 MAP3K12Q12852 859 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 MTMR2Q13614 643 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 FAM110CQ1W6H9 321 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 SH3D19Q5HYK7 790 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 METTL16Q86W50 562 aaKnown RBP22.29■■□□□ 1.16
ATG9A-222ENST00000488833 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 DDX19BQ9UMR2 479 aa22.29■■□□□ 1.16
ATG9A-222ENST00000488833 ADCY3O60266 1144 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 CCL5P13501 91 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 USP5P45974 858 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 FLT3LGP49771 235 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 JAG1P78504 1218 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 SHROOM1Q2M3G4 852 aaPredicted RBP22.28■■□□□ 1.16
ATG9A-222ENST00000488833 SHISA4Q96DD7 197 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 WDR18Q9BV38 432 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 DOCK3Q8IZD9 2030 aa22.28■■□□□ 1.16
ATG9A-222ENST00000488833 HMMRO75330 724 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms