RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 CTR9Q6PD62 1173 aa23.02■■□□□ 1.28
CCM2-216ENST00000488727 MIGA2Q7L4E1 593 aa23.02■■□□□ 1.28
CCM2-216ENST00000488727 RABEP1Q15276 862 aa23.02■■□□□ 1.28
CCM2-216ENST00000488727 PAPPA2Q9BXP8 1791 aa23.02■■□□□ 1.27
CCM2-216ENST00000488727 REC8O95072 547 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 POLR3DP05423 398 aaPredicted RBP23.01■■□□□ 1.27
CCM2-216ENST00000488727 NF2P35240 595 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 TDO2P48775 406 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 PRKG1Q13976 671 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 GSE1Q14687 1217 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 NACAP1Q9BZK3 213 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 PI4KBQ9UBF8 816 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 CIZ1Q9ULV3 898 aaPredicted RBP23.01■■□□□ 1.27
CCM2-216ENST00000488727 OTOFQ9HC10 1997 aa23.01■■□□□ 1.27
CCM2-216ENST00000488727 FAM196BA6NMK8 535 aa23■■□□□ 1.27
CCM2-216ENST00000488727 MOB2Q70IA6 237 aa23■■□□□ 1.27
CCM2-216ENST00000488727 NAPBQ9H115 298 aa23■■□□□ 1.27
CCM2-216ENST00000488727 ARPP21Q9UBL0 812 aaPredicted RBP23■■□□□ 1.27
CCM2-216ENST00000488727 K7ELQ4 463 aaPredicted RBP22.99■■□□□ 1.27
CCM2-216ENST00000488727 FGAP02671 866 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 HLA-DOAP06340 250 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 MAP3K10Q02779 954 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 PTH1RQ03431 593 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 ALX1Q15699 326 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 C12orf60Q5U649 245 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 TTC6Q86TZ1 520 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 DSCC1Q9BVC3 393 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 DNAJC18Q9H819 358 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 GBA2Q9HCG7 927 aaPredicted RBP22.99■■□□□ 1.27
CCM2-216ENST00000488727 USP2O75604 605 aaPredicted RBP22.99■■□□□ 1.27
CCM2-216ENST00000488727 SBK1Q52WX2 424 aa22.99■■□□□ 1.27
CCM2-216ENST00000488727 METTL16Q86W50 562 aaKnown RBP22.99■■□□□ 1.27
CCM2-216ENST00000488727 ZMYM6O95789 1325 aa22.98■■□□□ 1.27
CCM2-216ENST00000488727 HOOK2Q96ED9 719 aa22.98■■□□□ 1.27
CCM2-216ENST00000488727 EHD4Q9H223 541 aa22.98■■□□□ 1.27
CCM2-216ENST00000488727 LAMA4Q16363 1823 aa22.97■■□□□ 1.27
CCM2-216ENST00000488727 PPP1R12BO60237 982 aaPredicted RBP22.97■■□□□ 1.27
CCM2-216ENST00000488727 TBC1D12O60347 775 aa22.97■■□□□ 1.27
CCM2-216ENST00000488727 C1QTNF8P60827 252 aa22.97■■□□□ 1.27
CCM2-216ENST00000488727 DCAF15Q66K64 600 aa22.97■■□□□ 1.27
CCM2-216ENST00000488727 SPRYD3Q8NCJ5 442 aa22.97■■□□□ 1.27
CCM2-216ENST00000488727 SERPINB13Q9UIV8 391 aa22.97■■□□□ 1.27
CCM2-216ENST00000488727 ANGEL1Q9UNK9 670 aaKnown RBP22.97■■□□□ 1.27
CCM2-216ENST00000488727 MINDY4BA8MYZ0 360 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 APLP1P51693 650 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 GABPAQ06546 454 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 TTLL12Q14166 644 aaPredicted RBP22.96■■□□□ 1.27
CCM2-216ENST00000488727 FOXP4Q8IVH2 680 aaPredicted RBP22.96■■□□□ 1.27
CCM2-216ENST00000488727 DYNLL2Q96FJ2 89 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 LSG1Q9H089 658 aaKnown RBP22.96■■□□□ 1.27
CCM2-216ENST00000488727 HERC5Q9UII4 1024 aaKnown RBP22.96■■□□□ 1.27
CCM2-216ENST00000488727 MYH8P13535 1937 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 TMEM88BA6NKF7 163 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 MAP3K11Q16584 847 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 AMOTL1Q8IY63 956 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 CRACR2BQ8N4Y2 399 aaPredicted RBP22.96■■□□□ 1.27
CCM2-216ENST00000488727 C2orf69Q8N8R5 385 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 KLRG1Q96E93 195 aa22.96■■□□□ 1.27
CCM2-216ENST00000488727 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.96■■□□□ 1.27
CCM2-216ENST00000488727 CD2BP2O95400 341 aaKnown RBP22.95■■□□□ 1.26
CCM2-216ENST00000488727 FKBP1BP68106 108 aa22.95■■□□□ 1.26
CCM2-216ENST00000488727 PPARAQ07869 468 aa22.95■■□□□ 1.26
CCM2-216ENST00000488727 SLC44A5Q8NCS7 719 aa22.95■■□□□ 1.26
CCM2-216ENST00000488727 ZNF341Q9BYN7 854 aa22.95■■□□□ 1.26
CCM2-216ENST00000488727 ROBO3Q96MS0 1386 aa22.95■■□□□ 1.26
CCM2-216ENST00000488727 PHF20L1A8MW92 1017 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 UBE2Q2LH0YL09 131 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCM2-216ENST00000488727 ANO2Q9NQ90 1003 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 RRP1BQ14684 758 aaKnown RBP22.94■■□□□ 1.26
CCM2-216ENST00000488727 KIAA1211Q6ZU35 1233 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 ARMC9Q7Z3E5 817 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 SAPCD2Q86UD0 394 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 MAP4K1Q92918 833 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 WRNIP1Q96S55 665 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 ZNF112Q9UJU3 913 aa22.94■■□□□ 1.26
CCM2-216ENST00000488727 ATAD5Q96QE3 1844 aa22.93■■□□□ 1.26
CCM2-216ENST00000488727 INPP5BP32019 993 aa22.93■■□□□ 1.26
CCM2-216ENST00000488727 SHMT1P34896 483 aa22.93■■□□□ 1.26
CCM2-216ENST00000488727 IREB2P48200 963 aaKnown RBP22.93■■□□□ 1.26
CCM2-216ENST00000488727 STK11IPQ8N1F8 1099 aa22.93■■□□□ 1.26
CCM2-216ENST00000488727 TLL2Q9Y6L7 1015 aa22.93■■□□□ 1.26
CCM2-216ENST00000488727 MCM4P33991 863 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 HAND2P61296 217 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 CTDSPL2Q05D32 466 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 LDLRAD1Q5T700 205 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.92■■□□□ 1.26
CCM2-216ENST00000488727 C16orf86Q6ZW13 317 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 TRIM34Q9BYJ4 488 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 NBPF3Q9H094 633 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 DOCK1Q14185 1865 aa22.92■■□□□ 1.26
CCM2-216ENST00000488727 EPB41L2O43491 1005 aaKnown RBP22.91■■□□□ 1.26
CCM2-216ENST00000488727 TATDN1Q6P1N9 297 aa22.91■■□□□ 1.26
CCM2-216ENST00000488727 ZKSCAN4Q969J2 545 aaPredicted RBP22.91■■□□□ 1.26
CCM2-216ENST00000488727 CREBZFQ9NS37 354 aa22.91■■□□□ 1.26
CCM2-216ENST00000488727 ANAPC4Q9UJX5 808 aa22.91■■□□□ 1.26
CCM2-216ENST00000488727 TACC3Q9Y6A5 838 aa22.91■■□□□ 1.26
CCM2-216ENST00000488727 CDK8P49336 464 aa22.91■■□□□ 1.26
CCM2-216ENST00000488727 HUNKP57058 714 aa22.91■■□□□ 1.26
CCM2-216ENST00000488727 CLMNQ96JQ2 1002 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms