RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CCL15-CCL14A0A0B4J2E2 113 aa17.24■□□□□ 0.35
COL9A2-208ENST00000488463 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
COL9A2-208ENST00000488463 ADD2P35612 726 aa17.24■□□□□ 0.35
COL9A2-208ENST00000488463 CCL15Q16663 113 aa17.24■□□□□ 0.35
COL9A2-208ENST00000488463 CERS3Q8IU89 383 aa17.24■□□□□ 0.35
COL9A2-208ENST00000488463 SCYL3Q8IZE3 742 aa17.24■□□□□ 0.35
COL9A2-208ENST00000488463 DHX36Q9H2U1 1008 aaKnown RBP17.24■□□□□ 0.35
COL9A2-208ENST00000488463 GPR25O00155 361 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 CTNND1O60716 968 aaKnown RBP17.23■□□□□ 0.35
COL9A2-208ENST00000488463 PTPRAP18433 802 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 FAM43AQ8N2R8 423 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 PI4K2BQ8TCG2 481 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 ZNF296Q8WUU4 475 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-208ENST00000488463 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.23■□□□□ 0.35
COL9A2-208ENST00000488463 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 HERC5Q9UII4 1024 aaKnown RBP17.23■□□□□ 0.35
COL9A2-208ENST00000488463 PALD1Q9ULE6 856 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 CENPFP49454 3210 aa17.23■□□□□ 0.35
COL9A2-208ENST00000488463 NAV1Q8NEY1 1877 aa17.22■□□□□ 0.35
COL9A2-208ENST00000488463 RGS19P49795 217 aa17.22■□□□□ 0.35
COL9A2-208ENST00000488463 CRHR2Q13324 411 aa17.22■□□□□ 0.35
COL9A2-208ENST00000488463 SNAPC2Q13487 334 aa17.22■□□□□ 0.35
COL9A2-208ENST00000488463 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
COL9A2-208ENST00000488463 MAGEB6P1A0A0J9YX57 407 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 BTBD19C9JJ37 291 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 CETPP11597 493 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 JAG1P78504 1218 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 LCORLQ8N3X6 602 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 GCC1Q96CN9 775 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 MCOLN1Q9GZU1 580 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 SAP30BPQ9UHR5 308 aaKnown RBP17.21■□□□□ 0.35
COL9A2-208ENST00000488463 AFG3L2Q9Y4W6 797 aa17.21■□□□□ 0.35
COL9A2-208ENST00000488463 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.34
COL9A2-208ENST00000488463 CXCL11O14625 94 aa17.2■□□□□ 0.34
COL9A2-208ENST00000488463 IGHDP01880 384 aa17.2■□□□□ 0.34
COL9A2-208ENST00000488463 CAP2P40123 477 aa17.2■□□□□ 0.34
COL9A2-208ENST00000488463 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
COL9A2-208ENST00000488463 CCDC84Q86UT8 332 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-208ENST00000488463 FOXP4Q8IVH2 680 aaPredicted RBP17.2■□□□□ 0.34
COL9A2-208ENST00000488463 KBTBD3Q8NAB2 608 aa17.2■□□□□ 0.34
COL9A2-208ENST00000488463 ZHX2Q9Y6X8 837 aa17.2■□□□□ 0.34
COL9A2-208ENST00000488463 BAZ2AQ9UIF9 1905 aaKnown RBP17.19■□□□□ 0.34
COL9A2-208ENST00000488463 CCDC85CA6NKD9 419 aa17.19■□□□□ 0.34
COL9A2-208ENST00000488463 CAP1Q01518 475 aa17.19■□□□□ 0.34
COL9A2-208ENST00000488463 EVX2Q03828 476 aa17.19■□□□□ 0.34
COL9A2-208ENST00000488463 SHROOM1Q2M3G4 852 aaPredicted RBP17.19■□□□□ 0.34
COL9A2-208ENST00000488463 ANKRD45Q5TZF3 282 aa17.19■□□□□ 0.34
COL9A2-208ENST00000488463 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
COL9A2-208ENST00000488463 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
COL9A2-208ENST00000488463 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
COL9A2-208ENST00000488463 A0A0G2JLL6 359 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-208ENST00000488463 MX1P20591 662 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 USP5P45974 858 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 PLCD1P51178 756 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 SLC4A8Q2Y0W8 1093 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 PRRT2Q7Z6L0 340 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-208ENST00000488463 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 GPATCH3Q96I76 525 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 CRNKL1Q9BZJ0 848 aaKnown RBP17.18■□□□□ 0.34
COL9A2-208ENST00000488463 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.18■□□□□ 0.34
COL9A2-208ENST00000488463 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
COL9A2-208ENST00000488463 EHD4Q9H223 541 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 ARMT1Q9H993 441 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 DCP1AQ9NPI6 582 aaPredicted RBP17.18■□□□□ 0.34
COL9A2-208ENST00000488463 PICK1Q9NRD5 415 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 STAP2Q9UGK3 403 aa17.18■□□□□ 0.34
COL9A2-208ENST00000488463 LOC285556D6RIA3 1793 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 PRKAB2O43741 272 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 FKTNO75072 461 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 MBD4O95243 580 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 GABPAQ06546 454 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 TATDN1Q6P1N9 297 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 ANKRD23Q86SG2 305 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 ADGRA2Q96PE1 1338 aa17.17■□□□□ 0.34
COL9A2-208ENST00000488463 DGKZQ13574 1117 aa17.16■□□□□ 0.34
COL9A2-208ENST00000488463 TAF1CQ15572 869 aaPredicted RBP17.16■□□□□ 0.34
COL9A2-208ENST00000488463 CTU1Q7Z7A3 348 aaKnown RBP17.16■□□□□ 0.34
COL9A2-208ENST00000488463 GLRX3O76003 335 aaKnown RBP17.15■□□□□ 0.34
COL9A2-208ENST00000488463 HLA-DOAP06340 250 aa17.15■□□□□ 0.34
COL9A2-208ENST00000488463 PDE1AP54750 535 aa17.15■□□□□ 0.34
COL9A2-208ENST00000488463 OSBP2Q969R2 916 aa17.15■□□□□ 0.34
COL9A2-208ENST00000488463 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
COL9A2-208ENST00000488463 SERPINB13Q9UIV8 391 aa17.15■□□□□ 0.34
COL9A2-208ENST00000488463 ZSWIM8A7E2V4 1837 aa17.14■□□□□ 0.34
COL9A2-208ENST00000488463 SMIM22K7EJ46 135 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 ERC2O15083 957 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 RNF113AO15541 343 aaKnown RBP17.14■□□□□ 0.33
COL9A2-208ENST00000488463 TLR2O60603 784 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 CYP2D6P10635 497 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 SHMT1P34896 483 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 ZSCAN25Q6NSZ9 544 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 CRACR2BQ8N4Y2 399 aaPredicted RBP17.14■□□□□ 0.33
COL9A2-208ENST00000488463 STRBPQ96SI9 672 aaKnown RBP17.14■□□□□ 0.33
COL9A2-208ENST00000488463 WDR18Q9BV38 432 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 ZFYVE28Q9HCC9 887 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 BRCA2P51587 3418 aa17.14■□□□□ 0.33
COL9A2-208ENST00000488463 TRIM75PA6NK02 468 aa17.13■□□□□ 0.33
COL9A2-208ENST00000488463 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
COL9A2-208ENST00000488463 PDHXO00330 501 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms