RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 SLC4A8Q2Y0W8 1093 aa19.31■□□□□ 0.68
ERGIC3-216ENST00000488384 PLEKHM2Q8IWE5 1019 aa19.31■□□□□ 0.68
ERGIC3-216ENST00000488384 FSD1Q9BTV5 496 aa19.31■□□□□ 0.68
ERGIC3-216ENST00000488384 RNF113AO15541 343 aaKnown RBP19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 ZFYP08048 801 aaPredicted RBP19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 REM2Q8IYK8 340 aaPredicted RBP19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 SDR42E1Q8WUS8 393 aa19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 APPBP2Q92624 585 aa19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 OTUD5Q96G74 571 aa19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 BEGAINQ9BUH8 593 aa19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 DNAJC18Q9H819 358 aa19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 PI4KBQ9UBF8 816 aa19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 HERC5Q9UII4 1024 aaKnown RBP19.3■□□□□ 0.68
ERGIC3-216ENST00000488384 MANSC4A6NHS7 340 aaPredicted RBP19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 PRKAB2O43741 272 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 PDE4AP27815 886 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 SREBF2Q12772 1141 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 METTL16Q86W50 562 aaKnown RBP19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 ERO1BQ86YB8 467 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 SCYL3Q8IZE3 742 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 OSBP2Q969R2 916 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 OSBPL3Q9H4L5 887 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 ATAD5Q96QE3 1844 aa19.29■□□□□ 0.68
ERGIC3-216ENST00000488384 CA12O43570 354 aa19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 HLA-DOAP06340 250 aa19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 TM4SF4P48230 202 aa19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 PPIL2Q13356 520 aa19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 RRP1BQ14684 758 aaKnown RBP19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 EVI5LQ96CN4 794 aa19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 ABHD8Q96I13 439 aa19.28■□□□□ 0.68
ERGIC3-216ENST00000488384 BAZ2AQ9UIF9 1905 aaKnown RBP19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 M0R2C6 588 aa19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 LRRFIP1Q32MZ4 808 aaKnown RBP19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 EHD4Q9H223 541 aa19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 RNF186Q9NXI6 227 aa19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 SAGE1Q9NXZ1 904 aa19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 PHIPQ8WWQ0 1821 aa19.27■□□□□ 0.68
ERGIC3-216ENST00000488384 IRF6O14896 467 aa19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 CTNND1O60716 968 aaKnown RBP19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 PPATQ06203 517 aa19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 ZMYM1Q5SVZ6 1142 aa19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 FOXP4Q8IVH2 680 aaPredicted RBP19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 CRACR2BQ8N4Y2 399 aaPredicted RBP19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 STRBPQ96SI9 672 aaKnown RBP19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 MCM9Q9NXL9 1143 aa19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 SLC4A4Q9Y6R1 1079 aa19.26■□□□□ 0.67
ERGIC3-216ENST00000488384 TESPA1A2RU30 521 aaPredicted RBP19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 IGF2BP3O00425 579 aaKnown RBP eCLIP19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 GPAA1O43292 621 aa19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 PLCD1P51178 756 aa19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 EVX2Q03828 476 aa19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 TTC6Q86TZ1 520 aa19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 BRI3BPQ8WY22 251 aa19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 SEC62Q99442 399 aaKnown RBP19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 ATP8A2Q9NTI2 1148 aa19.25■□□□□ 0.67
ERGIC3-216ENST00000488384 TRPA1O75762 1119 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 CENPBP07199 599 aaPredicted RBP19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 CYP2D6P10635 497 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 PTPRAP18433 802 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 CAP2P40123 477 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 GTF2A2P52657 109 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 IFNL1Q8IU54 200 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 TRIM34Q9BYJ4 488 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 PICK1Q9NRD5 415 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 SERPINB13Q9UIV8 391 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 KCNH4Q9UQ05 1017 aa19.24■□□□□ 0.67
ERGIC3-216ENST00000488384 CCL15-CCL14A0A0B4J2E2 113 aa19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 POLR3DP05423 398 aaPredicted RBP19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 INHBEP58166 350 aa19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 GABPAQ06546 454 aa19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 CCL15Q16663 113 aa19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 CCDC84Q86UT8 332 aaPredicted RBP19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 PTPN18Q99952 460 aa19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 PTPRFP10586 1907 aa19.23■□□□□ 0.67
ERGIC3-216ENST00000488384 GSG1L2A8MUP6 293 aa19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 TRIM6-TRIM34B2RNG4 842 aa19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 JAG1P78504 1218 aa19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 SNAPC2Q13487 334 aa19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 SHROOM1Q2M3G4 852 aaPredicted RBP19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 EPB41L4AQ9HCS5 686 aaPredicted RBP19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 ZHX2Q9Y6X8 837 aa19.22■□□□□ 0.67
ERGIC3-216ENST00000488384 CYP2D7A0A087X1C5 515 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 SMIM22K7EJ46 135 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 GDF11O95390 407 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 CETPP11597 493 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 SHMT1P34896 483 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 RILPL2Q969X0 211 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 MCOLN1Q9GZU1 580 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 AFG3L2Q9Y4W6 797 aa19.21■□□□□ 0.67
ERGIC3-216ENST00000488384 A0A0D9SFI3 127 aa19.2■□□□□ 0.66
ERGIC3-216ENST00000488384 USP17L12C9JPN9 530 aa19.2■□□□□ 0.66
ERGIC3-216ENST00000488384 USP17L21D6R901 530 aa19.2■□□□□ 0.66
ERGIC3-216ENST00000488384 NEFLP07196 543 aa19.2■□□□□ 0.66
ERGIC3-216ENST00000488384 GSPT1P15170 499 aaKnown RBP19.2■□□□□ 0.66
ERGIC3-216ENST00000488384 GNAT2P19087 354 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms