RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 PCDHA7Q9UN72 937 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 MRVI1Q9Y6F6 885 aa18.58■□□□□ 0.56
RAPGEF3-211ENST00000488250 BAZ2AQ9UIF9 1905 aaKnown RBP18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 USP17L12C9JPN9 530 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 USP17L21D6R901 530 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 ATP2B4P23634 1241 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 TRIM29Q14134 588 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 DZIP1Q86YF9 867 aaKnown RBP18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 FAM200AQ8TCP9 573 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 GOLPH3LQ9H4A5 285 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 CLIC4Q9Y696 253 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 DLEC1Q9Y238 1755 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 POLRMTO00411 1230 aaKnown RBP18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 CAVIN2O95810 425 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 LDHBP07195 334 aaKnown RBP18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 GSTO1P78417 241 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 GPSM2P81274 684 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 DDR1Q08345 913 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 STK38Q15208 465 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 TXNRD1Q16881 649 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 ANO1Q5XXA6 986 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 TRIM22Q8IYM9 498 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 PROM2Q8N271 834 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 CRACR2BQ8N4Y2 399 aaPredicted RBP18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 CRAMP1Q96RY5 1269 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 SLC26A6Q9BXS9 759 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
RAPGEF3-211ENST00000488250 SPTLC2O15270 562 aa18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 SLC3A2P08195 630 aaKnown RBP18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 POTEAQ6S8J7 498 aa18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 IQCA1Q86XH1 822 aa18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 ENAHQ8N8S7 591 aaPredicted RBP18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 MRPS27Q92552 414 aaKnown RBP18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
RAPGEF3-211ENST00000488250 CYP2D7A0A087X1C5 515 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 SMIM22K7EJ46 135 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 DEXIO95424 95 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 PPP4CP60510 307 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 TMC4Q7Z404 712 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 CKAP2LQ8IYA6 745 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 NOL7Q9UMY1 257 aaKnown RBP18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 IL1R1P14778 569 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 SLC39A14Q15043 492 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 STK11IPQ8N1F8 1099 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 MKRN1Q9UHC7 482 aaKnown RBP18.55■□□□□ 0.56
RAPGEF3-211ENST00000488250 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 KINO60870 393 aaKnown RBP18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 CALM1P0DP23 149 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 CALM2P0DP24 149 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 CALM3P0DP25 149 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 SF3A1Q15459 793 aaKnown RBP18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 SASS6Q6UVJ0 657 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 CERS3Q8IU89 383 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 FMR1NBQ8N0W7 255 aaPredicted RBP18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 USP25Q9UHP3 1055 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
RAPGEF3-211ENST00000488250 SLC51AQ86UW1 340 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 RNF26Q9BY78 433 aaPredicted RBP18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 MYH2Q9UKX2 1941 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 PLSCR1O15162 318 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 PPP6R2O75170 966 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 DDAH1O94760 285 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 UFL1O94874 794 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 MMP1P03956 469 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 LDHCP07864 332 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 IFIT1BQ5T764 474 aaKnown RBP18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 CATIPQ7Z7H3 387 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 CD209Q9NNX6 404 aa18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 RBM28Q9NW13 759 aaKnown RBP18.53■□□□□ 0.56
RAPGEF3-211ENST00000488250 LTBP1Q14766 1721 aa18.52■□□□□ 0.56
RAPGEF3-211ENST00000488250 BAG3O95817 575 aa18.52■□□□□ 0.56
RAPGEF3-211ENST00000488250 PDE4BQ07343 736 aa18.52■□□□□ 0.56
RAPGEF3-211ENST00000488250 AXDND1Q5T1B0 1012 aaPredicted RBP18.52■□□□□ 0.56
RAPGEF3-211ENST00000488250 NUP133Q8WUM0 1156 aa18.52■□□□□ 0.56
RAPGEF3-211ENST00000488250 JAG2Q9Y219 1238 aa18.52■□□□□ 0.56
RAPGEF3-211ENST00000488250 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.55
RAPGEF3-211ENST00000488250 ADCY5O95622 1261 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 CMA1P23946 247 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 GUCY1A2P33402 732 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 TROAPQ12815 778 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 GNL2Q13823 731 aaKnown RBP18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 PTPAQ15257 358 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 SAFBQ15424 915 aaKnown RBP eCLIP18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 ANO6Q4KMQ2 910 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 JMYQ8N9B5 988 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 MAP3K14Q99558 947 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 FOXP1Q9H334 677 aaPredicted RBP18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 NRXN2Q9P2S2 1712 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 PRDM1O75626 825 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 FUT2Q10981 343 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 C12orf60Q5U649 245 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 NOSTRINQ8IVI9 506 aa18.51■□□□□ 0.55
RAPGEF3-211ENST00000488250 MROH7-TTC4A0A0A0MT08 1334 aa18.5■□□□□ 0.55
RAPGEF3-211ENST00000488250 UBE2Q2LH0YL09 131 aa18.5■□□□□ 0.55
RAPGEF3-211ENST00000488250 NLGN1Q8N2Q7 840 aa18.5■□□□□ 0.55
RAPGEF3-211ENST00000488250 TBC1D16Q8TBP0 767 aa18.5■□□□□ 0.55
RAPGEF3-211ENST00000488250 AKT1S1Q96B36 256 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms