RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 PLCB2Q00722 1185 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 SPC24Q8NBT2 197 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 JDP2Q8WYK2 163 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 NOL10Q9BSC4 688 aaKnown RBP15.94■□□□□ 0.14
COPS7B-221ENST00000488111 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 SUGT1Q9Y2Z0 365 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 ZBTB12Q9Y330 459 aaPredicted RBP15.94■□□□□ 0.14
COPS7B-221ENST00000488111 DAGLAQ9Y4D2 1042 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 PCDHAC2Q9Y5I4 1007 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 SMIM22K7EJ46 135 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 TSGA10IPQ3SY00 556 aa15.94■□□□□ 0.14
COPS7B-221ENST00000488111 LARP6Q9BRS8 491 aaKnown RBP15.94■□□□□ 0.14
COPS7B-221ENST00000488111 CRNKL1Q9BZJ0 848 aaKnown RBP15.94■□□□□ 0.14
COPS7B-221ENST00000488111 GPR75-ASB3A0A0A6YYF3 556 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 E7EWF7 191 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 SLC4A8Q2Y0W8 1093 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 SLF2Q8IX21 1173 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 INCENPQ9NQS7 918 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 CCDC88AQ3V6T2 1871 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 CYP2D7A0A087X1C5 515 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 F13A1P00488 732 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 CTDSPL2Q05D32 466 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 CXCL9Q07325 125 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 ALX1Q15699 326 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 TMED8Q6PL24 325 aaPredicted RBP15.93■□□□□ 0.14
COPS7B-221ENST00000488111 FAM163AQ96GL9 167 aaPredicted RBP15.93■□□□□ 0.14
COPS7B-221ENST00000488111 NEK1Q96PY6 1258 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 NBPF3Q9H094 633 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 ZSWIM6Q9HCJ5 1215 aa15.93■□□□□ 0.14
COPS7B-221ENST00000488111 STX6O43752 255 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 PTGS1P23219 599 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 USP5P45974 858 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 RBM5P52756 815 aaKnown RBP eCLIP15.92■□□□□ 0.14
COPS7B-221ENST00000488111 PPP4CP60510 307 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 TGFBRAP1Q8WUH2 860 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 ATP6V1DQ9Y5K8 247 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 CYP46A1Q9Y6A2 500 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 GAKO14976 1311 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 TCHHQ07283 1943 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 CRKP46108 304 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 FKBP1AP62942 108 aaKnown RBP15.92■□□□□ 0.14
COPS7B-221ENST00000488111 EVX2Q03828 476 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 RSBN1LQ6PCB5 846 aaPredicted RBP15.92■□□□□ 0.14
COPS7B-221ENST00000488111 BLOC1S2Q6QNY1 142 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 RUFY3Q7L099 469 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 TBC1D10CQ8IV04 446 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 TEKT1Q969V4 418 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 TM6SF1Q9BZW5 370 aa15.92■□□□□ 0.14
COPS7B-221ENST00000488111 DCP1AQ9NPI6 582 aaPredicted RBP15.92■□□□□ 0.14
COPS7B-221ENST00000488111 MAST2Q6P0Q8 1798 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 VIL1P09327 827 aaKnown RBP15.91■□□□□ 0.14
COPS7B-221ENST00000488111 CCDC192P0DO97 292 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 SYT1P21579 422 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 PSMA5P28066 241 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 KRT32Q14532 448 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 KIF18AQ8NI77 898 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 PAXBP1Q9Y5B6 917 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 MYH2Q9UKX2 1941 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 USP17L12C9JPN9 530 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 USP17L21D6R901 530 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 FIBPO43427 364 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 YBX3P16989 372 aaKnown RBP eCLIP15.91■□□□□ 0.14
COPS7B-221ENST00000488111 RHBDL3P58872 404 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 CHST3Q7LGC8 479 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 MAPKAPK5Q8IW41 473 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 TEX11Q8IYF3 940 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 FAM200AQ8TCP9 573 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 PDRG1Q9NUG6 133 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 LTBP3Q9NS15 1303 aa15.91■□□□□ 0.14
COPS7B-221ENST00000488111 TERF2Q15554 542 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 CTR9Q6PD62 1173 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 NKX2-3Q8TAU0 364 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 TTC14Q96N46 770 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 LRRC2Q9BYS8 371 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 TACC3Q9Y6A5 838 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 USP17L8P0C7I0 530 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 CYP2D6P10635 497 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 RPS6KB1P23443 525 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 AK2P54819 239 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 APOBEC3HQ6NTF7 200 aaKnown RBP15.9■□□□□ 0.14
COPS7B-221ENST00000488111 HHIPL2Q6UWX4 724 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 ATP8A2Q9NTI2 1148 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 USP40Q9NVE5 1235 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 FAM53CQ9NYF3 392 aa15.9■□□□□ 0.14
COPS7B-221ENST00000488111 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
COPS7B-221ENST00000488111 TNNT1P13805 278 aa15.89■□□□□ 0.13
COPS7B-221ENST00000488111 PPARAQ07869 468 aa15.89■□□□□ 0.13
COPS7B-221ENST00000488111 CIAPIN1Q6FI81 312 aa15.89■□□□□ 0.13
COPS7B-221ENST00000488111 SAP30BPQ9UHR5 308 aaKnown RBP15.89■□□□□ 0.13
COPS7B-221ENST00000488111 PICALMQ13492 652 aa15.89■□□□□ 0.13
COPS7B-221ENST00000488111 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.89■□□□□ 0.13
COPS7B-221ENST00000488111 ZMYM6O95789 1325 aa15.89■□□□□ 0.13
COPS7B-221ENST00000488111 CDC42EP5Q6NZY7 148 aa15.88■□□□□ 0.13
COPS7B-221ENST00000488111 CCDC186Q7Z3E2 898 aa15.88■□□□□ 0.13
COPS7B-221ENST00000488111 CCDC112Q8NEF3 446 aa15.88■□□□□ 0.13
COPS7B-221ENST00000488111 C16orf45Q96MC5 204 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms