RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 CWC27Q6UX04 472 aaKnown RBP20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 SLC44A5Q8NCS7 719 aa20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 ZNF341Q9BYN7 854 aa20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.61■□□□□ 0.89
SHROOM1-205ENST00000488072 USP17L12C9JPN9 530 aa20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 USP17L21D6R901 530 aa20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 POLR3DP05423 398 aaPredicted RBP20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 IREB2P48200 963 aaKnown RBP20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 MAP3K10Q02779 954 aa20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 ZNF112Q9UJU3 913 aa20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 SNCAIPQ9Y6H5 919 aa20.6■□□□□ 0.89
SHROOM1-205ENST00000488072 AK9Q5TCS8 1911 aa20.59■□□□□ 0.89
SHROOM1-205ENST00000488072 DCAF15Q66K64 600 aa20.59■□□□□ 0.89
SHROOM1-205ENST00000488072 CTR9Q6PD62 1173 aa20.59■□□□□ 0.89
SHROOM1-205ENST00000488072 FOCADQ5VW36 1801 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 COL2A1P02458 1487 aaPredicted RBP20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 GDF11O95390 407 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 APPP05067 770 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 SLC10A3P09131 477 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 MCMDC2Q4G0Z9 681 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 IFNL3Q8IZI9 196 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 SLC10A4Q96EP9 437 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 HELLSQ9NRZ9 838 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 PI4KBQ9UBF8 816 aa20.58■□□□□ 0.89
SHROOM1-205ENST00000488072 OTOFQ9HC10 1997 aa20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 PATL2C9JE40 543 aaKnown RBP20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 CHMLP26374 656 aa20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 LRRFIP1Q32MZ4 808 aaKnown RBP20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 DDX60LQ5H9U9 1706 aaKnown RBP20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 CERS3Q8IU89 383 aa20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 ANKRD13AQ8IZ07 590 aa20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 DHX36Q9H2U1 1008 aaKnown RBP20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 DIAPH3Q9NSV4 1193 aa20.57■□□□□ 0.88
SHROOM1-205ENST00000488072 KIF23Q02241 960 aaPredicted RBP20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 C12orf60Q5U649 245 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 CRACR2BQ8N4Y2 399 aaPredicted RBP20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 WNK4Q96J92 1243 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 HHIPL1Q96JK4 782 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 INCENPQ9NQS7 918 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 ATP8A2Q9NTI2 1148 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 TACC3Q9Y6A5 838 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 NAV1Q8NEY1 1877 aa20.56■□□□□ 0.88
SHROOM1-205ENST00000488072 MINDY4BA8MYZ0 360 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 TBC1D12O60347 775 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 HLA-DOAP06340 250 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 SHMT1P34896 483 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 GABPAQ06546 454 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 SPRYD7Q5W111 196 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 METTL16Q86W50 562 aaKnown RBP20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 OPTNQ96CV9 577 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 OTUD5Q96G74 571 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 MYH1P12882 1939 aa20.55■□□□□ 0.88
SHROOM1-205ENST00000488072 CCDC171Q6TFL3 1326 aa20.54■□□□□ 0.88
SHROOM1-205ENST00000488072 TDO2P48775 406 aa20.54■□□□□ 0.88
SHROOM1-205ENST00000488072 TTC6Q86TZ1 520 aa20.54■□□□□ 0.88
SHROOM1-205ENST00000488072 FOXP4Q8IVH2 680 aaPredicted RBP20.54■□□□□ 0.88
SHROOM1-205ENST00000488072 HOOK2Q96ED9 719 aa20.54■□□□□ 0.88
SHROOM1-205ENST00000488072 BAZ2AQ9UIF9 1905 aaKnown RBP20.54■□□□□ 0.88
SHROOM1-205ENST00000488072 CEP350Q5VT06 3117 aa20.53■□□□□ 0.88
SHROOM1-205ENST00000488072 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
SHROOM1-205ENST00000488072 NKX2-3Q8TAU0 364 aa20.53■□□□□ 0.88
SHROOM1-205ENST00000488072 SERPINB13Q9UIV8 391 aa20.53■□□□□ 0.88
SHROOM1-205ENST00000488072 CSADQ9Y600 493 aa20.53■□□□□ 0.88
SHROOM1-205ENST00000488072 CTDSPL2Q05D32 466 aa20.52■□□□□ 0.88
SHROOM1-205ENST00000488072 DGKZQ13574 1117 aa20.52■□□□□ 0.88
SHROOM1-205ENST00000488072 SCYL3Q8IZE3 742 aa20.52■□□□□ 0.88
SHROOM1-205ENST00000488072 HERC5Q9UII4 1024 aaKnown RBP20.52■□□□□ 0.88
SHROOM1-205ENST00000488072 SPDYE5A6NIY4 337 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 PRDM1O75626 825 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 FGAP02671 866 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 GNAT2P19087 354 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 CAP2P40123 477 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 ECE1P42892 770 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 BMP2KLQ5H9B9 411 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 NOL9Q5SY16 702 aaKnown RBP20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 TATDN1Q6P1N9 297 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 CLEC10AQ8IUN9 316 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 CCDC102AQ96A19 550 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 TRIM34Q9BYJ4 488 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 EHD4Q9H223 541 aa20.51■□□□□ 0.87
SHROOM1-205ENST00000488072 IRF6O14896 467 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 CTNND1O60716 968 aaKnown RBP20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 PTPRAP18433 802 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 CDK8P49336 464 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 HAND2P61296 217 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 PTH1RQ03431 593 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 SBK1Q52WX2 424 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 NAPBQ9H115 298 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 ZHX2Q9Y6X8 837 aa20.5■□□□□ 0.87
SHROOM1-205ENST00000488072 GH2P01242 217 aa20.49■□□□□ 0.87
SHROOM1-205ENST00000488072 AKR1B1P15121 316 aa20.49■□□□□ 0.87
SHROOM1-205ENST00000488072 GUCY1A2P33402 732 aa20.49■□□□□ 0.87
SHROOM1-205ENST00000488072 GIMAP6Q6P9H5 292 aa20.49■□□□□ 0.87
SHROOM1-205ENST00000488072 ARPP21Q9UBL0 812 aaPredicted RBP20.49■□□□□ 0.87
SHROOM1-205ENST00000488072 HIP1O00291 1037 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 PPARAQ07869 468 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 NOGQ13253 232 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 CERKLQ49MI3 558 aaPredicted RBP20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 C16orf86Q6ZW13 317 aa20.48■□□□□ 0.87
SHROOM1-205ENST00000488072 ERO1BQ86YB8 467 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms