RNA–Protein interactions for RNA: ENST00000488017.1

SMC4-220, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-220ENST00000488017 PITPNM2Q9BZ72 1349 aa7.2□□□□□ -1.26
SMC4-220ENST00000488017 IGHA2P01877 340 aa7.19□□□□□ -1.26
SMC4-220ENST00000488017 NKPD1Q17RQ9 610 aa7.19□□□□□ -1.26
SMC4-220ENST00000488017 PRR23BQ6ZRT6 265 aa7.19□□□□□ -1.26
SMC4-220ENST00000488017 C20orf173Q96LM9 149 aa7.19□□□□□ -1.26
SMC4-220ENST00000488017 CACNA2D2Q9NY47 1150 aa7.19□□□□□ -1.26
SMC4-220ENST00000488017 GNAT3A8MTJ3 354 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 GPR182O15218 404 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 NME2P22392 152 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 FCGRTP55899 365 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 FYB2Q5VWT5 728 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 DBX2Q6ZNG2 339 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 CYFIP1Q7L576 1253 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 KIRREL1Q96J84 757 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 NIF3L1Q9GZT8 377 aa7.18□□□□□ -1.26
SMC4-220ENST00000488017 ARID3CA6NKF2 412 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 HOXA5P20719 270 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 ZNF252P-AS1Q0IIN9 211 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 TMEM67Q5HYA8 995 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 MAP1SQ66K74 1059 aaPredicted RBP7.17□□□□□ -1.26
SMC4-220ENST00000488017 MPZL3Q6UWV2 235 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 STK35Q8TDR2 534 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 GPBAR1Q8TDU6 330 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 EPS8L3Q8TE67 593 aaKnown RBP7.17□□□□□ -1.26
SMC4-220ENST00000488017 RELTQ969Z4 430 aa7.17□□□□□ -1.26
SMC4-220ENST00000488017 ALKBH8Q96BT7 664 aaKnown RBP7.17□□□□□ -1.26
SMC4-220ENST00000488017 CARNS1A5YM72 827 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 NTF4P34130 210 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 SERPINB4P48594 390 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 DMRTB1Q96MA1 342 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 FOXQ1Q9C009 403 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 MAPK8IP1Q9UQF2 711 aa7.16□□□□□ -1.26
SMC4-220ENST00000488017 FANCGO15287 622 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 EOMESO95936 686 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 GDNFP39905 211 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 RING1Q06587 406 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 CCDC82Q8N4S0 544 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 KCT2Q8NC54 265 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 FBXO15Q8NCQ5 510 aaPredicted RBP7.15□□□□□ -1.26
SMC4-220ENST00000488017 TMC1Q8TDI8 760 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 ACSBG1Q96GR2 724 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 PRDM5Q9NQX1 630 aaPredicted RBP7.15□□□□□ -1.26
SMC4-220ENST00000488017 NLRP2Q9NX02 1062 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 USTQ9Y2C2 406 aa7.15□□□□□ -1.26
SMC4-220ENST00000488017 PPM1JQ5JR12 505 aa7.14□□□□□ -1.27
SMC4-220ENST00000488017 NPAS4Q8IUM7 802 aa7.14□□□□□ -1.27
SMC4-220ENST00000488017 CCDC120Q96HB5 630 aa7.14□□□□□ -1.27
SMC4-220ENST00000488017 CARS2Q9HA77 564 aaKnown RBP7.14□□□□□ -1.27
SMC4-220ENST00000488017 CD320Q9NPF0 282 aa7.14□□□□□ -1.27
SMC4-220ENST00000488017 CIAPIN1Q6FI81 312 aa7.13□□□□□ -1.27
SMC4-220ENST00000488017 C22orf34Q6ZV56 151 aa7.13□□□□□ -1.27
SMC4-220ENST00000488017 BCO2Q9BYV7 579 aa7.13□□□□□ -1.27
SMC4-220ENST00000488017 PICK1Q9NRD5 415 aa7.13□□□□□ -1.27
SMC4-220ENST00000488017 SEMA3GQ9NS98 782 aa7.13□□□□□ -1.27
SMC4-220ENST00000488017 TRIM37O94972 964 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 KCNA10Q16322 511 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 ZBTB37Q5TC79 503 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 SCARA3Q6AZY7 606 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 CDC37L1Q7L3B6 337 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 RBCK1Q9BYM8 510 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 CBX8Q9HC52 389 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 C19orf73Q9NVV2 129 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 AKAP2Q9Y2D5 859 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 SAMM50Q9Y512 469 aa7.12□□□□□ -1.27
SMC4-220ENST00000488017 LRIG2O94898 1065 aa7.11□□□□□ -1.27
SMC4-220ENST00000488017 TMEM253P0C7T8 217 aa7.11□□□□□ -1.27
SMC4-220ENST00000488017 ARMCX6Q7L4S7 300 aa7.11□□□□□ -1.27
SMC4-220ENST00000488017 UBE3DQ7Z6J8 389 aa7.11□□□□□ -1.27
SMC4-220ENST00000488017 HSPA12BQ96MM6 686 aa7.11□□□□□ -1.27
SMC4-220ENST00000488017 NECAB3Q96P71 396 aaPredicted RBP7.11□□□□□ -1.27
SMC4-220ENST00000488017 FAM155AB1AL88 458 aaPredicted RBP7.1□□□□□ -1.27
SMC4-220ENST00000488017 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
SMC4-220ENST00000488017 ATP13A1Q9HD20 1204 aa7.1□□□□□ -1.27
SMC4-220ENST00000488017 CSADQ9Y600 493 aa7.1□□□□□ -1.27
SMC4-220ENST00000488017 DCDC2CA8MYV0 355 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 MED14OSP0DP75 135 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 BMP6P22004 513 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 PI16Q6UXB8 463 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 THAP5Q7Z6K1 395 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 C12orf40Q86WS4 652 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 ZNF507Q8TCN5 953 aa7.09□□□□□ -1.27
SMC4-220ENST00000488017 FOXD2O60548 495 aaPredicted RBP7.08□□□□□ -1.28
SMC4-220ENST00000488017 SLITRK5O94991 958 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 LRRC14Q15048 493 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 SFRP5Q5T4F7 317 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 MPRIPQ6WCQ1 1025 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 ATG14Q6ZNE5 492 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 MFSD4AQ8N468 514 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 DIRC2Q96SL1 478 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 CEP44Q9C0F1 390 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 PARD6AQ9NPB6 346 aa7.08□□□□□ -1.28
SMC4-220ENST00000488017 NXPE4Q6UWF7 544 aa7.07□□□□□ -1.28
SMC4-220ENST00000488017 C3orf58Q8NDZ4 430 aa7.07□□□□□ -1.28
SMC4-220ENST00000488017 GRIN3AQ8TCU5 1115 aa7.07□□□□□ -1.28
SMC4-220ENST00000488017 TCAF2A6NFQ2 919 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 ENC1O14682 589 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 CDKAL1Q5VV42 579 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 LLGL2Q6P1M3 1020 aa7.06□□□□□ -1.28
SMC4-220ENST00000488017 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms