RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 THRAP3Q9Y2W1 955 aaKnown RBP13.43□□□□□ -0.26
TRA2B-214ENST00000487615 PALLDQ8WX93 1383 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 FANCCQ00597 558 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 TTC38Q5R3I4 469 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 PIK3AP1Q6ZUJ8 805 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 FTOQ9C0B1 505 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRA2B-214ENST00000487615 DNAI1Q9UI46 699 aa13.43□□□□□ -0.26
TRA2B-214ENST00000487615 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.43□□□□□ -0.267e-7■□□□□ 9.8
TRA2B-214ENST00000487615 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 MLKLQ8NB16 471 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 ZSCAN10Q96SZ4 725 aaPredicted RBP13.42□□□□□ -0.26
TRA2B-214ENST00000487615 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
TRA2B-214ENST00000487615 SAP30BPQ9UHR5 308 aaKnown RBP13.42□□□□□ -0.26
TRA2B-214ENST00000487615 hCG_1642624A0A1W2PR95 340 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 BTBD18B2RXH4 712 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 NDUFA8P51970 172 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 CMTR1Q8N1G2 835 aaKnown RBP13.42□□□□□ -0.26
TRA2B-214ENST00000487615 LRRC27Q9C0I9 530 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 CCDC181Q5TID7 509 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 CACNA2D4Q7Z3S7 1137 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 CUL5Q93034 780 aa13.42□□□□□ -0.26
TRA2B-214ENST00000487615 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 PARP1P09874 1014 aaKnown RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 RIMBP2O15034 1052 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 TFAP4Q01664 338 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 PDE4CQ08493 712 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 POSTNQ15063 836 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 TMX1Q9H3N1 280 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 IMPACTQ9P2X3 320 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 ABCC12Q96J65 1359 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 ZNF609O15014 1411 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 MEGF6O75095 1541 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 PCP11498 1178 aaKnown RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 ASIC1P78348 528 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 KIF23Q02241 960 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 SLC39A14Q15043 492 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 FAM47AQ5JRC9 791 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 LINC00301Q8NCQ3 95 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 FERMT2Q96AC1 680 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 TDRD7Q8NHU6 1098 aaKnown RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 CPDO75976 1380 aa13.41□□□□□ -0.26
TRA2B-214ENST00000487615 RPAP1Q9BWH6 1393 aaPredicted RBP13.41□□□□□ -0.26
TRA2B-214ENST00000487615 SEMA3EO15041 775 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 IQCEQ6IPM2 695 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 LCORLQ8N3X6 602 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 PLA2G12BQ9BX93 195 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 PPP1R1BQ9UD71 204 aaPredicted RBP13.4□□□□□ -0.26
TRA2B-214ENST00000487615 PRKAB2O43741 272 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 LIFRP42702 1097 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 ERFEQ4G0M1 354 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 DCCP43146 1447 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 ZSWIM5Q9P217 1185 aa13.4□□□□□ -0.26
TRA2B-214ENST00000487615 TRIM21P19474 475 aaKnown RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 CBX1P83916 185 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 MRFAP1L1Q96HT8 127 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 NFE2L3Q9Y4A8 694 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 EIF3JO75822 258 aaKnown RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 SLU7O95391 586 aaKnown RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 PNOCQ13519 176 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 SCARF1Q14162 830 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 CLEC4GQ6UXB4 293 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 KDM6AO15550 1401 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 NKX1-1Q15270 411 aaPredicted RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 MST1RQ04912 1400 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 CCDC175P0C221 793 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 IFNAR1P17181 557 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 STOX1Q6ZVD7 989 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 MAPKAPK5Q8IW41 473 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 TGFBRAP1Q8WUH2 860 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 EYA3Q99504 573 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 XPO4Q9C0E2 1151 aaKnown RBP13.39□□□□□ -0.27
TRA2B-214ENST00000487615 RIPOR2Q9Y4F9 1068 aa13.39□□□□□ -0.27
TRA2B-214ENST00000487615 SNAP23O00161 211 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 PPP1R12BO60237 982 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 CHGBP05060 677 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 TNNI2P48788 182 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 LETM2Q2VYF4 491 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 ATP8A2Q9NTI2 1148 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 USO1O60763 962 aaKnown RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 CCDC40Q4G0X9 1142 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 CT47A1Q5JQC4 288 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 WWC2Q6AWC2 1192 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 SMARCC2Q8TAQ2 1214 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 SERTAD1Q9UHV2 236 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 PPP6R2O75170 966 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 FMNL1O95466 1100 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 KCNQ4P56696 695 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 MYRIPQ8NFW9 859 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 TBC1D22AQ8WUA7 517 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 CLIC6Q96NY7 704 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 RNF26Q9BY78 433 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
TRA2B-214ENST00000487615 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
TRA2B-214ENST00000487615 KRT79Q5XKE5 535 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms