RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 MAPKAPK5Q8IW41 473 aa28.8■■■□□ 2.2
PLOD3-215ENST00000487563 TGFBRAP1Q8WUH2 860 aa28.8■■■□□ 2.2
PLOD3-215ENST00000487563 DHX36Q9H2U1 1008 aaKnown RBP28.8■■■□□ 2.2
PLOD3-215ENST00000487563 HERC5Q9UII4 1024 aaKnown RBP28.8■■■□□ 2.2
PLOD3-215ENST00000487563 RCAN3Q9UKA8 241 aa28.8■■■□□ 2.2
PLOD3-215ENST00000487563 POTEFA5A3E0 1075 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 CYP7A1P22680 504 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 PSMC4P43686 418 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 PRMT2P55345 433 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 TMEM106CQ9BVX2 250 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 TRIM34Q9BYJ4 488 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 IL1RAPL2Q9NP60 686 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 PI4KBQ9UBF8 816 aa28.79■■■□□ 2.2
PLOD3-215ENST00000487563 MYO5AQ9Y4I1 1855 aaKnown RBP28.78■■■□□ 2.2
PLOD3-215ENST00000487563 FLT1P17948 1338 aa28.78■■■□□ 2.2
PLOD3-215ENST00000487563 FMNL1O95466 1100 aaPredicted RBP28.78■■■□□ 2.2
PLOD3-215ENST00000487563 RPAP2Q8IXW5 612 aaPredicted RBP28.78■■■□□ 2.2
PLOD3-215ENST00000487563 ZNF333Q96JL9 665 aa28.78■■■□□ 2.2
PLOD3-215ENST00000487563 CHMP4BQ9H444 224 aaKnown RBP28.78■■■□□ 2.2
PLOD3-215ENST00000487563 APBB1O00213 710 aa28.77■■■□□ 2.2
PLOD3-215ENST00000487563 HOXD10P28358 340 aa28.77■■■□□ 2.2
PLOD3-215ENST00000487563 RHPN1Q8TCX5 695 aa28.77■■■□□ 2.2
PLOD3-215ENST00000487563 SLC45A1Q9Y2W3 748 aa28.77■■■□□ 2.2
PLOD3-215ENST00000487563 PHIPQ8WWQ0 1821 aa28.77■■■□□ 2.2
PLOD3-215ENST00000487563 PTPRFP10586 1907 aa28.77■■■□□ 2.2
PLOD3-215ENST00000487563 CAP2P40123 477 aa28.76■■■□□ 2.19
PLOD3-215ENST00000487563 CRACR2BQ8N4Y2 399 aaPredicted RBP28.76■■■□□ 2.19
PLOD3-215ENST00000487563 SMCR8Q8TEV9 937 aaPredicted RBP28.76■■■□□ 2.19
PLOD3-215ENST00000487563 TRIM47Q96LD4 638 aa28.76■■■□□ 2.19
PLOD3-215ENST00000487563 NDUFB9Q9Y6M9 179 aa28.76■■■□□ 2.19
PLOD3-215ENST00000487563 ATAD5Q96QE3 1844 aa28.76■■■□□ 2.19
PLOD3-215ENST00000487563 RBBP6Q7Z6E9 1792 aaKnown RBP28.75■■■□□ 2.19
PLOD3-215ENST00000487563 MAP3K12Q12852 859 aa28.75■■■□□ 2.19
PLOD3-215ENST00000487563 CLASRPQ8N2M8 674 aaKnown RBP28.75■■■□□ 2.19
PLOD3-215ENST00000487563 MAGEB6Q8N7X4 407 aa28.75■■■□□ 2.19
PLOD3-215ENST00000487563 TBC1D2Q9BYX2 928 aa28.75■■■□□ 2.19
PLOD3-215ENST00000487563 BCL11AQ9H165 835 aa28.75■■■□□ 2.19
PLOD3-215ENST00000487563 AGTPBP1Q9UPW5 1226 aa28.75■■■□□ 2.19
PLOD3-215ENST00000487563 BCRP11274 1271 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 FCGRTP55899 365 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 DYNLL1P63167 89 aaKnown RBP28.74■■■□□ 2.19
PLOD3-215ENST00000487563 SPP2Q13103 211 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 SLC4A8Q2Y0W8 1093 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 CERS3Q8IU89 383 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 MIGA1Q8NAN2 632 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 ZNF280CQ8ND82 737 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 SH3TC2Q8TF17 1288 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 KIF1BPQ96EK5 621 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 ZBTB40Q9NUA8 1239 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 SRRDQ9UH36 339 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 SAP30BPQ9UHR5 308 aaKnown RBP28.74■■■□□ 2.19
PLOD3-215ENST00000487563 CDK5RAP2Q96SN8 1893 aa28.74■■■□□ 2.19
PLOD3-215ENST00000487563 FOCADQ5VW36 1801 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 USP17L5A8MUK1 530 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 MYCP01106 439 aaPredicted RBP28.73■■■□□ 2.19
PLOD3-215ENST00000487563 HLA-DOAP06340 250 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 OSBPP22059 807 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 CTGFP29279 349 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 ANTXR1Q9H6X2 564 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 AS3MTQ9HBK9 375 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 PALD1Q9ULE6 856 aa28.73■■■□□ 2.19
PLOD3-215ENST00000487563 MYPNQ86TC9 1320 aa28.72■■■□□ 2.19
PLOD3-215ENST00000487563 RAET1EQ8TD07 263 aa28.72■■■□□ 2.19
PLOD3-215ENST00000487563 PNMA3Q9UL41 463 aa28.72■■■□□ 2.19
PLOD3-215ENST00000487563 SIPA1L1O43166 1804 aa28.71■■■□□ 2.19
PLOD3-215ENST00000487563 IFIT2P09913 472 aaKnown RBP28.71■■■□□ 2.19
PLOD3-215ENST00000487563 USP5P45974 858 aa28.71■■■□□ 2.19
PLOD3-215ENST00000487563 RRP1BQ14684 758 aaKnown RBP28.71■■■□□ 2.19
PLOD3-215ENST00000487563 PRPF38BQ5VTL8 546 aaKnown RBP28.71■■■□□ 2.19
PLOD3-215ENST00000487563 FOXP4Q8IVH2 680 aaPredicted RBP28.71■■■□□ 2.19
PLOD3-215ENST00000487563 PROCA1Q8NCQ7 364 aaPredicted RBP28.71■■■□□ 2.19
PLOD3-215ENST00000487563 KIAA0100Q14667 2235 aaKnown RBP28.71■■■□□ 2.19
PLOD3-215ENST00000487563 EN2P19622 333 aaPredicted RBP28.7■■■□□ 2.18
PLOD3-215ENST00000487563 HMGCS2P54868 508 aa28.7■■■□□ 2.18
PLOD3-215ENST00000487563 TTF1Q15361 905 aaPredicted RBP28.7■■■□□ 2.18
PLOD3-215ENST00000487563 TREML2Q5T2D2 321 aa28.7■■■□□ 2.18
PLOD3-215ENST00000487563 TMED8Q6PL24 325 aaPredicted RBP28.7■■■□□ 2.18
PLOD3-215ENST00000487563 CENPFP49454 3210 aa28.69■■■□□ 2.18
PLOD3-215ENST00000487563 ASNSP08243 561 aa28.69■■■□□ 2.18
PLOD3-215ENST00000487563 PABPC4Q13310 644 aaKnown RBP eCLIP28.69■■■□□ 2.18
PLOD3-215ENST00000487563 SIRT2Q8IXJ6 389 aa28.69■■■□□ 2.18
PLOD3-215ENST00000487563 RAB11FIP3O75154 756 aa28.68■■■□□ 2.18
PLOD3-215ENST00000487563 DNAJC18Q9H819 358 aa28.68■■■□□ 2.18
PLOD3-215ENST00000487563 LOC285556D6RIA3 1793 aa28.67■■■□□ 2.18
PLOD3-215ENST00000487563 DNAJC2Q99543 621 aaKnown RBP28.67■■■□□ 2.18
PLOD3-215ENST00000487563 GDF11O95390 407 aa28.66■■■□□ 2.18
PLOD3-215ENST00000487563 GRK4P32298 578 aa28.66■■■□□ 2.18
PLOD3-215ENST00000487563 PRKCZQ05513 592 aa28.66■■■□□ 2.18
PLOD3-215ENST00000487563 METTL16Q86W50 562 aaKnown RBP28.66■■■□□ 2.18
PLOD3-215ENST00000487563 MGAMO43451 1857 aa28.66■■■□□ 2.18
PLOD3-215ENST00000487563 MTMR2Q13614 643 aa28.65■■■□□ 2.18
PLOD3-215ENST00000487563 ANKRD13CQ8N6S4 541 aa28.65■■■□□ 2.18
PLOD3-215ENST00000487563 WDR18Q9BV38 432 aa28.65■■■□□ 2.18
PLOD3-215ENST00000487563 GINM1Q9NU53 330 aa28.65■■■□□ 2.18
PLOD3-215ENST00000487563 TMOD4Q9NZQ9 345 aa28.65■■■□□ 2.18
PLOD3-215ENST00000487563 BIN2Q9UBW5 565 aaPredicted RBP28.65■■■□□ 2.18
PLOD3-215ENST00000487563 GOLIM4O00461 696 aa28.64■■■□□ 2.18
PLOD3-215ENST00000487563 TNPO2O14787 897 aaKnown RBP28.64■■■□□ 2.18
PLOD3-215ENST00000487563 PDE3AQ14432 1141 aa28.64■■■□□ 2.18
PLOD3-215ENST00000487563 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms