RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 CERS3Q8IU89 383 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 DNAJC2Q99543 621 aaKnown RBP13.92□□□□□ -0.18
SPEN-205ENST00000487496 BOLA2Q9H3K6 86 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 DCTPP1Q9H773 170 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.92□□□□□ -0.18
SPEN-205ENST00000487496 HERC5Q9UII4 1024 aaKnown RBP13.92□□□□□ -0.18
SPEN-205ENST00000487496 PALD1Q9ULE6 856 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 TRIM17Q9Y577 477 aa13.92□□□□□ -0.18
SPEN-205ENST00000487496 PDHXO00330 501 aa13.91□□□□□ -0.18
SPEN-205ENST00000487496 PDE6AP16499 860 aa13.91□□□□□ -0.18
SPEN-205ENST00000487496 ATP5JP18859 108 aa13.91□□□□□ -0.18
SPEN-205ENST00000487496 CAP1Q01518 475 aa13.91□□□□□ -0.18
SPEN-205ENST00000487496 RRP1BQ14684 758 aaKnown RBP13.91□□□□□ -0.18
SPEN-205ENST00000487496 SLC9C2Q5TAH2 1124 aa13.91□□□□□ -0.18
SPEN-205ENST00000487496 CCDC84Q86UT8 332 aaPredicted RBP13.91□□□□□ -0.18
SPEN-205ENST00000487496 METTL16Q86W50 562 aaKnown RBP13.91□□□□□ -0.18
SPEN-205ENST00000487496 FOXP4Q8IVH2 680 aaPredicted RBP13.91□□□□□ -0.18
SPEN-205ENST00000487496 EDC3Q96F86 508 aaKnown RBP13.91□□□□□ -0.18
SPEN-205ENST00000487496 PCDHB15Q9Y5E8 787 aa13.91□□□□□ -0.18
SPEN-205ENST00000487496 A0A0G2JLL6 359 aaPredicted RBP13.9□□□□□ -0.18
SPEN-205ENST00000487496 CAP2P40123 477 aa13.9□□□□□ -0.18
SPEN-205ENST00000487496 GPAT2Q6NUI2 795 aa13.9□□□□□ -0.18
SPEN-205ENST00000487496 FASTKD5Q7L8L6 764 aaKnown RBP13.9□□□□□ -0.18
SPEN-205ENST00000487496 PRRT2Q7Z6L0 340 aaPredicted RBP13.9□□□□□ -0.18
SPEN-205ENST00000487496 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
SPEN-205ENST00000487496 EFCC1Q9HA90 598 aa13.9□□□□□ -0.18
SPEN-205ENST00000487496 SAP30BPQ9UHR5 308 aaKnown RBP13.9□□□□□ -0.18
SPEN-205ENST00000487496 MAGEB6P1A0A0J9YX57 407 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 TCRBV5S4A2TA0A5A2 114 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 TRIM75PA6NK02 468 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 USP5P45974 858 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 RGS19P49795 217 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 C17orf99Q6UX52 265 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 HAUS7Q99871 368 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 DNAJC18Q9H819 358 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 PAG1Q9NWQ8 432 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 ZNF532Q9HCE3 1301 aa13.89□□□□□ -0.19
SPEN-205ENST00000487496 HLA-DOAP06340 250 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 SPP2Q13103 211 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 SLC4A8Q2Y0W8 1093 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 GADL1Q6ZQY3 521 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 CRACR2BQ8N4Y2 399 aaPredicted RBP13.88□□□□□ -0.19
SPEN-205ENST00000487496 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 CRBNQ96SW2 442 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 TRIM34Q9BYJ4 488 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 CPA4Q9UI42 421 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 ADGRA2Q96PE1 1338 aa13.88□□□□□ -0.19
SPEN-205ENST00000487496 DOCK1Q14185 1865 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 USP17L5A8MUK1 530 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 CYP2C8P10632 490 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 ADD2P35612 726 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 SOX10P56693 466 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 JAG1P78504 1218 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 PARK7Q99497 189 aaKnown RBP13.87□□□□□ -0.19
SPEN-205ENST00000487496 TBC1D2Q9BYX2 928 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 ECHDC1Q9NTX5 307 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 SLC45A1Q9Y2W3 748 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
SPEN-205ENST00000487496 SIPA1L1O43166 1804 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 FOCADQ5VW36 1801 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 ASNSP08243 561 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 LACTBP83111 547 aaPredicted RBP13.86□□□□□ -0.19
SPEN-205ENST00000487496 SLFNL1Q499Z3 407 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 TTC6Q86TZ1 520 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 CRNKL1Q9BZJ0 848 aaKnown RBP13.86□□□□□ -0.19
SPEN-205ENST00000487496 ARHGAP39Q9C0H5 1083 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.86□□□□□ -0.19
SPEN-205ENST00000487496 EHD4Q9H223 541 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 AS3MTQ9HBK9 375 aa13.86□□□□□ -0.19
SPEN-205ENST00000487496 GDF11O95390 407 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 PLCD1P51178 756 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 KIF22Q14807 665 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 SHROOM1Q2M3G4 852 aaPredicted RBP13.85□□□□□ -0.19
SPEN-205ENST00000487496 LCORLQ8N3X6 602 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 WDR18Q9BV38 432 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 ARMT1Q9H993 441 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 GINM1Q9NU53 330 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 SERPINB13Q9UIV8 391 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 AGTPBP1Q9UPW5 1226 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 PHIPQ8WWQ0 1821 aa13.85□□□□□ -0.19
SPEN-205ENST00000487496 CHGBP05060 677 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 BCRP11274 1271 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 CTGFP29279 349 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 HMGCS2P54868 508 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 MLLT1Q03111 559 aaPredicted RBP13.84□□□□□ -0.19
SPEN-205ENST00000487496 UBE3CQ15386 1083 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 SH3D19Q5HYK7 790 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 TREML2Q5T2D2 321 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 TATDN1Q6P1N9 297 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
SPEN-205ENST00000487496 SDR42E1Q8WUS8 393 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 GPATCH3Q96I76 525 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
SPEN-205ENST00000487496 ECM2O94769 699 aaPredicted RBP13.83□□□□□ -0.2
SPEN-205ENST00000487496 MBD4O95243 580 aa13.83□□□□□ -0.2
SPEN-205ENST00000487496 GNRH1P01148 92 aa13.83□□□□□ -0.2
SPEN-205ENST00000487496 POLR3DP05423 398 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms