RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 ANAPC4Q9UJX5 808 aa7.98□□□□□ -1.13
PTPRE-209ENST00000487428 PARP14Q460N5 1801 aa7.98□□□□□ -1.13
PTPRE-209ENST00000487428 CCDC171Q6TFL3 1326 aa7.98□□□□□ -1.13
PTPRE-209ENST00000487428 A0A0D9SFI3 127 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 TESPA1A2RU30 521 aaPredicted RBP7.97□□□□□ -1.13
PTPRE-209ENST00000487428 SPDYE5A6NIY4 337 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 FAM155AB1AL88 458 aaPredicted RBP7.97□□□□□ -1.13
PTPRE-209ENST00000487428 FOXP2O15409 715 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 SLC10A3P09131 477 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 CHMLP26374 656 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 CAP2P40123 477 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 HUNKP57058 714 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 INHBEP58166 350 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 TCP10Q12799 353 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 C16orf86Q6ZW13 317 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 ERO1BQ86YB8 467 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 ZFPM1Q8IX07 1006 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 AMOTL1Q8IY63 956 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 CFHR5Q9BXR6 569 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 DNAJC18Q9H819 358 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 ARMT1Q9H993 441 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 ZNF287Q9HBT7 754 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 ZCCHC17Q9NP64 241 aaKnown RBP7.97□□□□□ -1.13
PTPRE-209ENST00000487428 DIAPH3Q9NSV4 1193 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 SYNPO2Q9UMS6 1093 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
PTPRE-209ENST00000487428 M0R2C6 588 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 SGSM2O43147 1006 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 EIF5BO60841 1220 aaKnown RBP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 ASNSP08243 561 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 HSPD1P10809 573 aaKnown RBP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 PPATQ06203 517 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 FMR1Q06787 632 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 NOM1Q5C9Z4 860 aaKnown RBP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 CTR9Q6PD62 1173 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 MAPKAPK5Q8IW41 473 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 CDAN1Q8IWY9 1227 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 SCYL3Q8IZE3 742 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 IFNL3Q8IZI9 196 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 SDR42E1Q8WUS8 393 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 RILPL2Q969X0 211 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 EPB41L4AQ9HCS5 686 aaPredicted RBP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 MCM9Q9NXL9 1143 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 PALD1Q9ULE6 856 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 ANGEL1Q9UNK9 670 aaKnown RBP7.96□□□□□ -1.14
PTPRE-209ENST00000487428 KCNH4Q9UQ05 1017 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 CSADQ9Y600 493 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 SLC4A4Q9Y6R1 1079 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 PCNTO95613 3336 aa7.96□□□□□ -1.14
PTPRE-209ENST00000487428 RLFQ13129 1914 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 USP17L12C9JPN9 530 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 USP17L21D6R901 530 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 CXCL11O14625 94 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 CHGBP05060 677 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 TM4SF4P48230 202 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 PLCD1P51178 756 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 PPIL2Q13356 520 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 PICALMQ13492 652 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 VGLL4Q14135 290 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 PRAMEF18Q5VWM3 479 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 SPRYD7Q5W111 196 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 DLK2Q6UY11 383 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 RASAL3Q86YV0 1011 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 ZSCAN29Q8IWY8 852 aaPredicted RBP7.95□□□□□ -1.14
PTPRE-209ENST00000487428 FAM227BQ96M60 508 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 WRNIP1Q96S55 665 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 SEC62Q99442 399 aaKnown RBP7.95□□□□□ -1.14
PTPRE-209ENST00000487428 WDR18Q9BV38 432 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPRE-209ENST00000487428 SNCAIPQ9Y6H5 919 aa7.95□□□□□ -1.14
PTPRE-209ENST00000487428 WDR33Q9C0J8 1336 aaKnown RBP7.95□□□□□ -1.14
PTPRE-209ENST00000487428 MANSC4A6NHS7 340 aaPredicted RBP7.94□□□□□ -1.14
PTPRE-209ENST00000487428 UBE2Q2LH0YL09 131 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 CA12O43570 354 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 PRKAB2O43741 272 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 ORC4O43929 436 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 CDC45O75419 566 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 FGAP02671 866 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
PTPRE-209ENST00000487428 SLC3A2P08195 630 aaKnown RBP7.94□□□□□ -1.14
PTPRE-209ENST00000487428 SHMT1P34896 483 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 NOVP48745 357 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 SH3D19Q5HYK7 790 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 PPP4R3BQ5MIZ7 849 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 ZNF589Q86UQ0 364 aaPredicted RBP7.94□□□□□ -1.14
PTPRE-209ENST00000487428 MAP4K1Q92918 833 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 SLC10A4Q96EP9 437 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 WNK4Q96J92 1243 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 MS4A4AQ96JQ5 239 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 CAPNS2Q96L46 248 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 NAPBQ9H115 298 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 CTNNA3Q9UI47 895 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 ABT1Q9ULW3 272 aaKnown RBP7.94□□□□□ -1.14
PTPRE-209ENST00000487428 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTPRE-209ENST00000487428 SLC45A1Q9Y2W3 748 aa7.94□□□□□ -1.14
PTPRE-209ENST00000487428 C19orf81C9J6K1 198 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 ALDH1A1P00352 501 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms