RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 FOCADQ5VW36 1801 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 GAKO14976 1311 aa8.79□□□□□ -1
UBE4B-209ENST00000487244 HMMRO75330 724 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 CYP2E1P05181 493 aaPredicted RBP8.78□□□□□ -1
UBE4B-209ENST00000487244 SLC10A3P09131 477 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 UQCRFS1P1P0C7P4 283 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 NF2P35240 595 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 ZAP70P43403 619 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 FKBP1BP68106 108 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 TNFAIP1Q13829 316 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 SMYD5Q6GMV2 418 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 ERC1Q8IUD2 1116 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 CLMNQ96JQ2 1002 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 PIH1D3Q9NQM4 214 aaKnown RBP8.78□□□□□ -1
UBE4B-209ENST00000487244 TSKSQ9UJT2 592 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 ANGEL1Q9UNK9 670 aaKnown RBP8.78□□□□□ -1
UBE4B-209ENST00000487244 PCDHB15Q9Y5E8 787 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 PPP2R3BQ9Y5P8 575 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 MYH7P12883 1935 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 MROH7-TTC4A0A0A0MT08 1334 aa8.78□□□□□ -1
UBE4B-209ENST00000487244 CASP8AP2Q9UKL3 1982 aa8.77□□□□□ -1
UBE4B-209ENST00000487244 SMARCA5O60264 1052 aaPredicted RBP8.77□□□□□ -1.01
UBE4B-209ENST00000487244 BTDP43251 543 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 TCP10Q12799 353 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 HSP90AB4PQ58FF6 505 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 CCDC158Q5M9N0 1113 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 LDLRAD1Q5T700 205 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 ERICH6Q7L0X2 663 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 ADGRA1Q86SQ6 560 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 ZFPM1Q8IX07 1006 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 ZGPATQ8N5A5 531 aaKnown RBP8.77□□□□□ -1.01
UBE4B-209ENST00000487244 NSUN4Q96CB9 384 aaKnown RBP8.77□□□□□ -1.01
UBE4B-209ENST00000487244 KIF1BPQ96EK5 621 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 CHMP4BQ9H444 224 aaKnown RBP8.77□□□□□ -1.01
UBE4B-209ENST00000487244 USP40Q9NVE5 1235 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 RAI14Q9P0K7 980 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 FAM198AQ9UFP1 575 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 SIPA1L1O43166 1804 aa8.77□□□□□ -1.01
UBE4B-209ENST00000487244 RPAP1Q9BWH6 1393 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 USP2O75604 605 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 SLURP2P0DP57 97 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 MAP2K2P36507 400 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 RHBDL3P58872 404 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 KIF23Q02241 960 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 NOGQ13253 232 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 MAP3K11Q16584 847 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 COL13A1Q5TAT6 717 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 SPTY2D1Q68D10 685 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 ARMC9Q7Z3E5 817 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 CCDC102AQ96A19 550 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 ZNF512BQ96KM6 892 aaPredicted RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 NBPF3Q9H094 633 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 ANTXR1Q9H6X2 564 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 DDX4Q9NQI0 724 aaKnown RBP8.76□□□□□ -1.01
UBE4B-209ENST00000487244 TMOD2Q9NZR1 351 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 LRP2BPQ9P2M1 347 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 RABGEF1Q9UJ41 708 aa8.76□□□□□ -1.01
UBE4B-209ENST00000487244 GPR75-ASB3A0A0A6YYF3 556 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 TESPA1A2RU30 521 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-209ENST00000487244 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 RAB11FIP3O75154 756 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 WDHD1O75717 1129 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-209ENST00000487244 HSPA8P11142 646 aaKnown RBP8.75□□□□□ -1.01
UBE4B-209ENST00000487244 GJA5P36382 358 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 TNNI2P48788 182 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 RGS3P49796 1198 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 LBX1P52954 281 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 MAP2K1Q02750 393 aaPredicted RBP8.75□□□□□ -1.01
UBE4B-209ENST00000487244 SUPT20HL1Q3ZLR7 823 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 FKBP1CQ5VVH2 108 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 SH3BP5LQ7L8J4 393 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 FAM83AQ86UY5 434 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 CLASRPQ8N2M8 674 aaKnown RBP8.75□□□□□ -1.01
UBE4B-209ENST00000487244 EDC3Q96F86 508 aaKnown RBP8.75□□□□□ -1.01
UBE4B-209ENST00000487244 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
UBE4B-209ENST00000487244 ATRNL1Q5VV63 1379 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 MYH1P12882 1939 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 BHMG1C9JSJ3 638 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 PPP1R12BO60237 982 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 IFIT2P09913 472 aaKnown RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 PICALMQ13492 652 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 VGLL4Q14135 290 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 SPRYD7Q5W111 196 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 TSHZ3Q63HK5 1081 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 NAA16Q6N069 864 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 MIGA2Q7L4E1 593 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 PACS2Q86VP3 889 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 SH3RF3Q8TEJ3 882 aaPredicted RBP8.74□□□□□ -1.01
UBE4B-209ENST00000487244 FAM151AQ8WW52 585 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 CSRNP1Q96S65 589 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 IDI2Q9BXS1 227 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 LRRCC1Q9C099 1032 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 DCTPP1Q9H773 170 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 ATAD5Q96QE3 1844 aa8.74□□□□□ -1.01
UBE4B-209ENST00000487244 DOCK1Q14185 1865 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms