RNA–Protein interactions for RNA: ENST00000487194.1

VAMP3-203, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 4

Gene VAMP3, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-203ENST00000487194 CPLX1O14810 134 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 NPM3O75607 178 aaKnown RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 BAG4O95429 457 aaKnown RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 USP17L8P0C7I0 530 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 CALM1P0DP23 149 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 CALM2P0DP24 149 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 CALM3P0DP25 149 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 ZSCAN22P10073 491 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 PTGER2P43116 358 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 CCT2P78371 535 aaKnown RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 LARP1BQ659C4 914 aaKnown RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 RSBN1LQ6PCB5 846 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 TTC6Q86TZ1 520 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 KIAA0825Q8IV33 1275 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 KLHL34Q8N239 644 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 RGS22Q8NE09 1264 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 NSUN7Q8NE18 718 aaKnown RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 ZSCAN10Q96SZ4 725 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 MXD3Q9BW11 206 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 SPON1Q9HCB6 807 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 INCENPQ9NQS7 918 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 GPHNQ9NQX3 736 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 ZNF277Q9NRM2 450 aaPredicted RBP7.21□□□□□ -1.26
VAMP3-203ENST00000487194 USP40Q9NVE5 1235 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 HDAC9Q9UKV0 1011 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 BRPF3Q9ULD4 1205 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 ZNRF3Q9ULT6 936 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 TACC3Q9Y6A5 838 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 NAV1Q8NEY1 1877 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 FLT1P17948 1338 aa7.21□□□□□ -1.26
VAMP3-203ENST00000487194 NID2Q14112 1375 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 PTPDC1A2A3K4 754 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 DCAF8L1A6NGE4 600 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 TSPY2A6NKD2 308 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 GOLGA8AA7E2F4 631 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 YDJCA8MPS7 323 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 H3BQV1 296 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 PRDM1O75626 825 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 VIL1P09327 827 aaKnown RBP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 CYP2D6P10635 497 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 SCNN1DP51172 638 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 RBM5P52756 815 aaKnown RBP eCLIP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 PKP1Q13835 747 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 SEC23AQ15436 765 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 SKOR2Q2VWA4 1001 aaPredicted RBP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 IFIT1BQ5T764 474 aaKnown RBP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 APOBEC3HQ6NTF7 200 aaKnown RBP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 CDC42EP5Q6NZY7 148 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 APOA5Q6Q788 366 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 C16orf86Q6ZW13 317 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 CATIPQ7Z7H3 387 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 ZNF444Q8N0Y2 327 aaPredicted RBP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 STK11IPQ8N1F8 1099 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 OGFOD1Q8N543 542 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 AGBL3Q8NEM8 1001 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 KCNQ5Q9NR82 932 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 TCP11L1Q9NUJ3 509 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 SAP30BPQ9UHR5 308 aaKnown RBP7.2□□□□□ -1.26
VAMP3-203ENST00000487194 HPS5Q9UPZ3 1129 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 BCS1LQ9Y276 419 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 ZDHHC9Q9Y397 364 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 TNKSO95271 1327 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 LTBP3Q9NS15 1303 aa7.2□□□□□ -1.26
VAMP3-203ENST00000487194 SCN9AQ15858 1988 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 VPS37CA5D8V6 355 aaPredicted RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 JAK2O60674 1132 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 WDHD1O75717 1129 aaPredicted RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 DDAH1O94760 285 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 CTDNEP1O95476 244 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 F13A1P00488 732 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 HLA-DOAP06340 250 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 PLCD1P51178 756 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 C1QTNF8P60827 252 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 TFAP4Q01664 338 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 PICALMQ13492 652 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 TNIP1Q15025 636 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 RTN1Q16799 776 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 CSPP1Q1MSJ5 1256 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 CFAP100Q494V2 611 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 PPP4R3BQ5MIZ7 849 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 MICU3Q86XE3 530 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 DGKHQ86XP1 1220 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 ZNF654Q8IZM8 581 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 ENAHQ8N8S7 591 aaPredicted RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 WASF1Q92558 559 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 ANKS1AQ92625 1134 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 DDX11Q96FC9 970 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 ZKSCAN3Q9BRR0 538 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 IDI2Q9BXS1 227 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 OSBPL5Q9H0X9 879 aaPredicted RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 DHX36Q9H2U1 1008 aaKnown RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 NCOA5Q9HCD5 579 aaKnown RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 RBM28Q9NW13 759 aaKnown RBP7.19□□□□□ -1.26
VAMP3-203ENST00000487194 TMOD2Q9NZR1 351 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 SWAP70Q9UH65 585 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 MTMR6Q9Y217 621 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 PSME4Q14997 1843 aa7.19□□□□□ -1.26
VAMP3-203ENST00000487194 STK36Q9NRP7 1315 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms