RNA–Protein interactions for RNA: ENST00000487168.1

KRIT1-223, Transcript of KRIT1, ankyrin repeat containing, human

TSL 2

Gene KRIT1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KRIT1-223	ENST00000487168	TBC1D12	O60347	775 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	WDHD1	O75717	1129 aa	Predicted RBP	12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	BTD	P43251	543 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	RHBDL3	P58872	404 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	MAP3K12	Q12852	859 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	NOL9	Q5SY16	702 aa	Known RBP	12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	NAA16	Q6N069	864 aa	Predicted RBP	12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	ZNF384	Q8TF68	577 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	DHX36	Q9H2U1	1008 aa	Known RBP	12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	RAI14	Q9P0K7	980 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	FAM198A	Q9UFP1	575 aa		12.07	□□□□□ -0.48
KRIT1-223	ENST00000487168	ATP5J	P18859	108 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	RGS3	P49796	1198 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	GRM1	Q13255	1194 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	OTUD7B	Q6GQQ9	843 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	PI16	Q6UXB8	463 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	MOB2	Q70IA6	237 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	TICAM2	Q86XR7	235 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	ERO1B	Q86YB8	467 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	GPATCH3	Q96I76	525 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	WNK4	Q96J92	1243 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	TBC1D2	Q9BYX2	928 aa		12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	DAXX	Q9UER7	740 aa	Predicted RBP	12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	SCAF8	Q9UPN6	1271 aa	Known RBP	12.06	□□□□□ -0.48
KRIT1-223	ENST00000487168	FOCAD	Q5VW36	1801 aa		12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	ZAP70	P43403	619 aa		12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	CACNB3	P54284	484 aa		12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	NFIA	Q12857	509 aa		12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	MKRN3	Q13064	507 aa	Known RBP	12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	HDAC1	Q13547	482 aa	Predicted RBP	12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	VGLL4	Q14135	290 aa		12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	CCDC8	Q9H0W5	538 aa	Predicted RBP	12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	GINM1	Q9NU53	330 aa		12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	TLR7	Q9NYK1	1049 aa	Known RBP	12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	HERC5	Q9UII4	1024 aa	Known RBP	12.05	□□□□□ -0.48
KRIT1-223	ENST00000487168	GTF2A2	P52657	109 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	LBX1	P52954	281 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	PPAT	Q06203	517 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	PPIL2	Q13356	520 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	TBC1D9	Q6ZT07	1266 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	METTL16	Q86W50	562 aa	Known RBP	12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	WRNIP1	Q96S55	665 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	RNF186	Q9NXI6	227 aa		12.04	□□□□□ -0.48
KRIT1-223	ENST00000487168	IRX5	P78411	483 aa	Predicted RBP	12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	GCC1	Q96CN9	775 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	OPTN	Q96CV9	577 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	CLMN	Q96JQ2	1002 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	ZIC5	Q96T25	663 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	HAUS7	Q99871	368 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	IL1RAPL2	Q9NP60	686 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	PIH1D3	Q9NQM4	214 aa	Known RBP	12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	SNCAIP	Q9Y6H5	919 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	TTC41P	Q6P2S7	1318 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	HTT	P42858	3142 aa		12.03	□□□□□ -0.48
KRIT1-223	ENST00000487168	PHF20L1	A8MW92	1017 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	CTNND1	O60716	968 aa	Known RBP	12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	CETP	P11597	493 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	SNAPC2	Q13487	334 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	LRRFIP1	Q32MZ4	808 aa	Known RBP	12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	ZSCAN25	Q6NSZ9	544 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	CDAN1	Q8IWY9	1227 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	TEX11	Q8IYF3	940 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	SNRK	Q9NRH2	765 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	ECHDC1	Q9NTX5	307 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	PI4KB	Q9UBF8	816 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	KCNH4	Q9UQ05	1017 aa		12.02	□□□□□ -0.49
KRIT1-223	ENST00000487168	CXCL11	O14625	94 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	IDH1	O75874	414 aa	Known RBP	12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	TCP10	Q12799	353 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	PRKG1	Q13976	671 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	UBE3C	Q15386	1083 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	PKN2	Q16513	984 aa	Known RBP	12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	IFFO2	Q5TF58	517 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	SCYL3	Q8IZE3	742 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	TNS4	Q8IZW8	715 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	EHD4	Q9H223	541 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	DDX4	Q9NQI0	724 aa	Known RBP	12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	PAG1	Q9NWQ8	432 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	PCDHB15	Q9Y5E8	787 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	FLT1	P17948	1338 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	AK9	Q5TCS8	1911 aa		12.01	□□□□□ -0.49
KRIT1-223	ENST00000487168	CDK5RAP2	Q96SN8	1893 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	TRPA1	O75762	1119 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	PDE6A	P16499	860 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	CYP7A1	P22680	504 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	GJA5	P36382	358 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	SH3BP5L	Q7L8J4	393 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12	□□□□□ -0.49
KRIT1-223	ENST00000487168	YTHDC1	Q96MU7	727 aa	Known RBP	12	□□□□□ -0.49
KRIT1-223	ENST00000487168	OCEL1	Q9H607	264 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	ELP3	Q9H9T3	547 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	PICK1	Q9NRD5	415 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	AATF	Q9NY61	560 aa	Known RBP eCLIP	12	□□□□□ -0.49
KRIT1-223	ENST00000487168	SLC45A1	Q9Y2W3	748 aa		12	□□□□□ -0.49
KRIT1-223	ENST00000487168	DOCK1	Q14185	1865 aa		12	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms