RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CNTNAP4Q9C0A0 1308 aa6.45□□□□□ -1.38
SNRNP27-204ENST00000487029 EIF1AYO14602 144 aaKnown RBP6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 EOMESO95936 686 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 NEFLP07196 543 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 TRIM26Q12899 539 aaPredicted RBP6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 MAP1SQ66K74 1059 aaPredicted RBP6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 SULF2Q8IWU5 870 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 GPBAR1Q8TDU6 330 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 DIRC2Q96SL1 478 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 GTF2IRD1Q9UHL9 959 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 GPN3Q9UHW5 284 aaPredicted RBP6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 MTMR7Q9Y216 660 aa6.44□□□□□ -1.38
SNRNP27-204ENST00000487029 NPIPB6E9PJ23 425 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 GPR182O15218 404 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 FCGRTP55899 365 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 TMEM67Q5HYA8 995 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 CYFIP1Q7L576 1253 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 NIF3L1Q9GZT8 377 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 ATP13A1Q9HD20 1204 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 SEMA3GQ9NS98 782 aa6.43□□□□□ -1.38
SNRNP27-204ENST00000487029 ZBTB7CA1YPR0 619 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 PRR33A8MZF0 331 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 H3BRB1 525 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 ARNTP27540 789 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 ZNF252P-AS1Q0IIN9 211 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 PI16Q6UXB8 463 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 DTHD1Q6ZMT9 781 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 AMIGO3Q86WK7 504 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 HSPA12BQ96MM6 686 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 NSUN3Q9H649 340 aaKnown RBP6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 TUT1Q9H6E5 874 aaKnown RBP6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 CACNA2D2Q9NY47 1150 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 TRAK1Q9UPV9 953 aa6.42□□□□□ -1.38
SNRNP27-204ENST00000487029 INHBBP09529 407 aa6.41□□□□□ -1.38
SNRNP27-204ENST00000487029 SERPINB4P48594 390 aa6.41□□□□□ -1.38
SNRNP27-204ENST00000487029 CLCN7P51798 805 aa6.41□□□□□ -1.38
SNRNP27-204ENST00000487029 PPP2R3AQ06190 1150 aa6.41□□□□□ -1.38
SNRNP27-204ENST00000487029 FBXO15Q8NCQ5 510 aaPredicted RBP6.41□□□□□ -1.38
SNRNP27-204ENST00000487029 EGFL7Q9UHF1 273 aa6.41□□□□□ -1.38
SNRNP27-204ENST00000487029 NFIBO00712 420 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 GDNFP39905 211 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 RING1Q06587 406 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 C12orf40Q86WS4 652 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 GRIN3AQ8TCU5 1115 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 DNAJC25Q9H1X3 360 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 CD320Q9NPF0 282 aa6.4□□□□□ -1.38
SNRNP27-204ENST00000487029 GNAT3A8MTJ3 354 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 DCDC2CA8MYV0 355 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 NDUFB5O43674 189 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 PDE3BQ13370 1112 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 ATG14Q6ZNE5 492 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 AEBP1Q8IUX7 1158 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 GLYCTKQ8IVS8 523 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 C20orf173Q96LM9 149 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 RAPGEFL1Q9UHV5 662 aa6.39□□□□□ -1.39
SNRNP27-204ENST00000487029 SLITRK5O94991 958 aa6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 BRD1O95696 1058 aa6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 NME2P22392 152 aa6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 CDKAL1Q5VV42 579 aa6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 CSRNP1Q96S65 589 aa6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 PRDM5Q9NQX1 630 aaPredicted RBP6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 PODXL2Q9NZ53 605 aa6.38□□□□□ -1.39
SNRNP27-204ENST00000487029 PATL2C9JE40 543 aaKnown RBP6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 HNRNPUQ00839 825 aaKnown RBP eCLIP6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 KCNA10Q16322 511 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 ZBTB37Q5TC79 503 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 ARMCX6Q7L4S7 300 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 ACSBG1Q96GR2 724 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 FOXQ1Q9C009 403 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 CBX8Q9HC52 389 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 AKAP2Q9Y2D5 859 aa6.37□□□□□ -1.39
SNRNP27-204ENST00000487029 H3BS24 57 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 ETV2O00321 342 aaPredicted RBP6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 TMEM253P0C7T8 217 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 MED14OSP0DP75 135 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 BMP6P22004 513 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 RASIP1Q5U651 963 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 B4GALNT3Q6L9W6 998 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 NPAS4Q8IUM7 802 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 BCO2Q9BYV7 579 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 DCP1AQ9NPI6 582 aaPredicted RBP6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 MAPK8IP1Q9UQF2 711 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 ST14Q9Y5Y6 855 aa6.36□□□□□ -1.39
SNRNP27-204ENST00000487029 PAGE1O75459 146 aa6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 HOXA5P20719 270 aa6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 CTSWP56202 376 aa6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 ERVFC1P60507 584 aa6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 KCNA1Q09470 495 aa6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 RIN3Q8TB24 985 aa6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 SMG5Q9UPR3 1016 aaKnown RBP6.35□□□□□ -1.39
SNRNP27-204ENST00000487029 FAM155AB1AL88 458 aaPredicted RBP6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 FANCGO15287 622 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 FGD1P98174 961 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 NXPE4Q6UWF7 544 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 TMC1Q8TDI8 760 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 NECAB3Q96P71 396 aaPredicted RBP6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 CITED4Q96RK1 184 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 EMILIN2Q9BXX0 1053 aa6.34□□□□□ -1.39
SNRNP27-204ENST00000487029 EPB41L4BQ9H329 900 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms