RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 R3HDMLQ9H3Y0 253 aa19.35■□□□□ 0.69
HDAC8-218ENST00000486704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.35■□□□□ 0.69
HDAC8-218ENST00000486704 PICK1Q9NRD5 415 aa19.35■□□□□ 0.69
HDAC8-218ENST00000486704 MYH8P13535 1937 aa19.35■□□□□ 0.69
HDAC8-218ENST00000486704 SLURP2P0DP57 97 aa19.34■□□□□ 0.69
HDAC8-218ENST00000486704 PTPRAP18433 802 aa19.34■□□□□ 0.69
HDAC8-218ENST00000486704 CRHR2Q13324 411 aa19.34■□□□□ 0.69
HDAC8-218ENST00000486704 HDAC1Q13547 482 aaPredicted RBP19.34■□□□□ 0.69
HDAC8-218ENST00000486704 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.34■□□□□ 0.69
HDAC8-218ENST00000486704 ZNF532Q9HCE3 1301 aa19.33■□□□□ 0.69
HDAC8-218ENST00000486704 FKTNO75072 461 aa19.33■□□□□ 0.68
HDAC8-218ENST00000486704 ADD2P35612 726 aa19.33■□□□□ 0.68
HDAC8-218ENST00000486704 DGKZQ13574 1117 aa19.33■□□□□ 0.68
HDAC8-218ENST00000486704 CTU1Q7Z7A3 348 aaKnown RBP19.33■□□□□ 0.68
HDAC8-218ENST00000486704 FAM43AQ8N2R8 423 aa19.33■□□□□ 0.68
HDAC8-218ENST00000486704 MCOLN1Q9GZU1 580 aa19.33■□□□□ 0.68
HDAC8-218ENST00000486704 BAZ2AQ9UIF9 1905 aaKnown RBP19.33■□□□□ 0.68
HDAC8-218ENST00000486704 MAGEB6P1A0A0J9YX57 407 aa19.32■□□□□ 0.68
HDAC8-218ENST00000486704 FAM196BA6NMK8 535 aa19.32■□□□□ 0.68
HDAC8-218ENST00000486704 CXCL11O14625 94 aa19.32■□□□□ 0.68
HDAC8-218ENST00000486704 USP5P45974 858 aa19.32■□□□□ 0.68
HDAC8-218ENST00000486704 ABHD8Q96I13 439 aa19.32■□□□□ 0.68
HDAC8-218ENST00000486704 TTC41PQ6P2S7 1318 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 BTBD19C9JJ37 291 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 HLA-DOAP06340 250 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 MOGSQ13724 837 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 TAF1CQ15572 869 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-218ENST00000486704 FOXP4Q8IVH2 680 aaPredicted RBP19.31■□□□□ 0.68
HDAC8-218ENST00000486704 GCC1Q96CN9 775 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 TBC1D2Q9BYX2 928 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 DNAJC18Q9H819 358 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 PALD1Q9ULE6 856 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 AFG3L2Q9Y4W6 797 aa19.31■□□□□ 0.68
HDAC8-218ENST00000486704 A0A0G2JLL6 359 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-218ENST00000486704 CAP2P40123 477 aa19.3■□□□□ 0.68
HDAC8-218ENST00000486704 UBE3CQ15386 1083 aa19.3■□□□□ 0.68
HDAC8-218ENST00000486704 PRRT2Q7Z6L0 340 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-218ENST00000486704 ANKRD23Q86SG2 305 aa19.3■□□□□ 0.68
HDAC8-218ENST00000486704 CRNKL1Q9BZJ0 848 aaKnown RBP19.3■□□□□ 0.68
HDAC8-218ENST00000486704 EHD4Q9H223 541 aa19.3■□□□□ 0.68
HDAC8-218ENST00000486704 ZFYVE28Q9HCC9 887 aa19.3■□□□□ 0.68
HDAC8-218ENST00000486704 SAP30BPQ9UHR5 308 aaKnown RBP19.3■□□□□ 0.68
HDAC8-218ENST00000486704 ZHX2Q9Y6X8 837 aa19.3■□□□□ 0.68
HDAC8-218ENST00000486704 SALL3Q9BXA9 1300 aa19.29■□□□□ 0.68
HDAC8-218ENST00000486704 ZSCAN25Q6NSZ9 544 aa19.29■□□□□ 0.68
HDAC8-218ENST00000486704 CRACR2BQ8N4Y2 399 aaPredicted RBP19.29■□□□□ 0.68
HDAC8-218ENST00000486704 RRP1BQ14684 758 aaKnown RBP19.28■□□□□ 0.68
HDAC8-218ENST00000486704 PKN2Q16513 984 aaKnown RBP19.28■□□□□ 0.68
HDAC8-218ENST00000486704 LCORLQ8N3X6 602 aa19.28■□□□□ 0.68
HDAC8-218ENST00000486704 KBTBD3Q8NAB2 608 aa19.28■□□□□ 0.68
HDAC8-218ENST00000486704 TRIM34Q9BYJ4 488 aa19.28■□□□□ 0.68
HDAC8-218ENST00000486704 GINM1Q9NU53 330 aa19.28■□□□□ 0.68
HDAC8-218ENST00000486704 MGAMO43451 1857 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 ERC2O15083 957 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 ASNSP08243 561 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 TSHZ3Q63HK5 1081 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 FASTKD5Q7L8L6 764 aaKnown RBP19.27■□□□□ 0.68
HDAC8-218ENST00000486704 TTC6Q86TZ1 520 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 PI4K2BQ8TCG2 481 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 ERO1AQ96HE7 468 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.27■□□□□ 0.68
HDAC8-218ENST00000486704 ZSWIM8A7E2V4 1837 aa19.27■□□□□ 0.68
HDAC8-218ENST00000486704 TLR2O60603 784 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 GLRX3O76003 335 aaKnown RBP19.26■□□□□ 0.67
HDAC8-218ENST00000486704 MBD4O95243 580 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 MX1P20591 662 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 EXOC6Q8TAG9 804 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 SERPINB13Q9UIV8 391 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 TAOK2Q9UL54 1235 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 SLC45A1Q9Y2W3 748 aa19.26■□□□□ 0.67
HDAC8-218ENST00000486704 SUPT16HQ9Y5B9 1047 aaKnown RBP19.26■□□□□ 0.67
HDAC8-218ENST00000486704 ADGRA2Q96PE1 1338 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 TRIM75PA6NK02 468 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 USP17L5A8MUK1 530 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 PDHXO00330 501 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 SP3Q02447 781 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 GPAT2Q6NUI2 795 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 TATDN1Q6P1N9 297 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 SMC5Q8IY18 1101 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 OTUD7AQ8TE49 926 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-218ENST00000486704 ARMT1Q9H993 441 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 DCP1AQ9NPI6 582 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-218ENST00000486704 ATP8A2Q9NTI2 1148 aa19.25■□□□□ 0.67
HDAC8-218ENST00000486704 ZBTB47Q9UFB7 747 aaPredicted RBP19.25■□□□□ 0.67
HDAC8-218ENST00000486704 CAPN15O75808 1086 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 ZFYP08048 801 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-218ENST00000486704 SLFNL1Q499Z3 407 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 ANKRD45Q5TZF3 282 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 CCDC84Q86UT8 332 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-218ENST00000486704 ZNF280CQ8ND82 737 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 SDR42E1Q8WUS8 393 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 PARK7Q99497 189 aaKnown RBP19.24■□□□□ 0.67
HDAC8-218ENST00000486704 WDR18Q9BV38 432 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 RWDD1Q9H446 243 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-218ENST00000486704 AS3MTQ9HBK9 375 aa19.24■□□□□ 0.67
HDAC8-218ENST00000486704 CHGBP05060 677 aa19.23■□□□□ 0.67
HDAC8-218ENST00000486704 SLC4A8Q2Y0W8 1093 aa19.23■□□□□ 0.67
HDAC8-218ENST00000486704 PROCA1Q8NCQ7 364 aaPredicted RBP19.23■□□□□ 0.67
HDAC8-218ENST00000486704 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
HDAC8-218ENST00000486704 ZBTB21Q9ULJ3 1066 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms