RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 TRPA1O75762 1119 aa21.97■■□□□ 1.11
COL1A1-207ENST00000486572 CHGBP05060 677 aa21.97■■□□□ 1.11
COL1A1-207ENST00000486572 PDE1AP54750 535 aa21.97■■□□□ 1.11
COL1A1-207ENST00000486572 SCYL3Q8IZE3 742 aa21.97■■□□□ 1.11
COL1A1-207ENST00000486572 NAV1Q8NEY1 1877 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 CTNND1O60716 968 aaKnown RBP21.96■■□□□ 1.11
COL1A1-207ENST00000486572 MBD4O95243 580 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 HLA-DOAP06340 250 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 PPATQ06203 517 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 PPIL2Q13356 520 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 ARMT1Q9H993 441 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 PRDM10Q9NQV6 1147 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 DOCK1Q14185 1865 aa21.96■■□□□ 1.11
COL1A1-207ENST00000486572 ZFYP08048 801 aaPredicted RBP21.95■■□□□ 1.1
COL1A1-207ENST00000486572 GTF2A2P52657 109 aa21.95■■□□□ 1.1
COL1A1-207ENST00000486572 LRRFIP1Q32MZ4 808 aaKnown RBP21.95■■□□□ 1.1
COL1A1-207ENST00000486572 MS4A4AQ96JQ5 239 aa21.95■■□□□ 1.1
COL1A1-207ENST00000486572 PICK1Q9NRD5 415 aa21.95■■□□□ 1.1
COL1A1-207ENST00000486572 MYH1P12882 1939 aa21.95■■□□□ 1.1
COL1A1-207ENST00000486572 TESPA1A2RU30 521 aaPredicted RBP21.94■■□□□ 1.1
COL1A1-207ENST00000486572 IRF6O14896 467 aa21.94■■□□□ 1.1
COL1A1-207ENST00000486572 RNF113AO15541 343 aaKnown RBP21.94■■□□□ 1.1
COL1A1-207ENST00000486572 METTL16Q86W50 562 aaKnown RBP21.94■■□□□ 1.1
COL1A1-207ENST00000486572 IFNL1Q8IU54 200 aa21.94■■□□□ 1.1
COL1A1-207ENST00000486572 FOXP4Q8IVH2 680 aaPredicted RBP21.94■■□□□ 1.1
COL1A1-207ENST00000486572 CRACR2BQ8N4Y2 399 aaPredicted RBP21.94■■□□□ 1.1
COL1A1-207ENST00000486572 FSD1Q9BTV5 496 aa21.94■■□□□ 1.1
COL1A1-207ENST00000486572 TRIM34Q9BYJ4 488 aa21.94■■□□□ 1.1
COL1A1-207ENST00000486572 ALDH1A1P00352 501 aa21.93■■□□□ 1.1
COL1A1-207ENST00000486572 SLC4A8Q2Y0W8 1093 aa21.93■■□□□ 1.1
COL1A1-207ENST00000486572 TTC6Q86TZ1 520 aa21.93■■□□□ 1.1
COL1A1-207ENST00000486572 SDR42E1Q8WUS8 393 aa21.93■■□□□ 1.1
COL1A1-207ENST00000486572 APPBP2Q92624 585 aa21.93■■□□□ 1.1
COL1A1-207ENST00000486572 PUS7LQ9H0K6 701 aaKnown RBP21.93■■□□□ 1.1
COL1A1-207ENST00000486572 CCL15-CCL14A0A0B4J2E2 113 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 IGF2BP3O00425 579 aaKnown RBP eCLIP21.92■■□□□ 1.1
COL1A1-207ENST00000486572 PTPRAP18433 802 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 SNAPC2Q13487 334 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 CCL15Q16663 113 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 COL13A1Q5TAT6 717 aaPredicted RBP21.92■■□□□ 1.1
COL1A1-207ENST00000486572 OTUD7BQ6GQQ9 843 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 EHD4Q9H223 541 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 DNAJC18Q9H819 358 aa21.92■■□□□ 1.1
COL1A1-207ENST00000486572 DCP1AQ9NPI6 582 aaPredicted RBP21.92■■□□□ 1.1
COL1A1-207ENST00000486572 CETPP11597 493 aa21.91■■□□□ 1.1
COL1A1-207ENST00000486572 BRI3BPQ8WY22 251 aa21.91■■□□□ 1.1
COL1A1-207ENST00000486572 ATP8A2Q9NTI2 1148 aa21.91■■□□□ 1.1
COL1A1-207ENST00000486572 MCM9Q9NXL9 1143 aa21.91■■□□□ 1.1
COL1A1-207ENST00000486572 KCNH4Q9UQ05 1017 aa21.91■■□□□ 1.1
COL1A1-207ENST00000486572 PRKAB2O43741 272 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 POLR3DP05423 398 aaPredicted RBP21.9■■□□□ 1.1
COL1A1-207ENST00000486572 CAP2P40123 477 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 OSBP2Q969R2 916 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 EVI5LQ96CN4 794 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 PTPN18Q99952 460 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 CFHR5Q9BXR6 569 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 SERPINB13Q9UIV8 391 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 ZHX2Q9Y6X8 837 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 ATAD5Q96QE3 1844 aa21.9■■□□□ 1.1
COL1A1-207ENST00000486572 TBC1D8O95759 1140 aa21.89■■□□□ 1.09
COL1A1-207ENST00000486572 RRP1BQ14684 758 aaKnown RBP21.89■■□□□ 1.09
COL1A1-207ENST00000486572 PLEKHM2Q8IWE5 1019 aa21.89■■□□□ 1.09
COL1A1-207ENST00000486572 DDRGK1Q96HY6 314 aa21.89■■□□□ 1.09
COL1A1-207ENST00000486572 OSBPL3Q9H4L5 887 aa21.89■■□□□ 1.09
COL1A1-207ENST00000486572 SLC4A4Q9Y6R1 1079 aa21.89■■□□□ 1.09
COL1A1-207ENST00000486572 PLCD1P51178 756 aa21.88■■□□□ 1.09
COL1A1-207ENST00000486572 STRBPQ96SI9 672 aaKnown RBP21.88■■□□□ 1.09
COL1A1-207ENST00000486572 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.88■■□□□ 1.09
COL1A1-207ENST00000486572 CXCL11O14625 94 aa21.87■■□□□ 1.09
COL1A1-207ENST00000486572 AFG3L2Q9Y4W6 797 aa21.87■■□□□ 1.09
COL1A1-207ENST00000486572 PHIPQ8WWQ0 1821 aa21.87■■□□□ 1.09
COL1A1-207ENST00000486572 M0R2C6 588 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 GPAA1O43292 621 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 ASNSP08243 561 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 ZMYM1Q5SVZ6 1142 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 TATDN1Q6P1N9 297 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 CCDC84Q86UT8 332 aaPredicted RBP21.86■■□□□ 1.09
COL1A1-207ENST00000486572 AMOTL1Q8IY63 956 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 FAM43AQ8N2R8 423 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 TBC1D2Q9BYX2 928 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 GINM1Q9NU53 330 aa21.86■■□□□ 1.09
COL1A1-207ENST00000486572 GDF11O95390 407 aa21.85■■□□□ 1.09
COL1A1-207ENST00000486572 GNAT2P19087 354 aa21.85■■□□□ 1.09
COL1A1-207ENST00000486572 NOM1Q5C9Z4 860 aaKnown RBP21.85■■□□□ 1.09
COL1A1-207ENST00000486572 ZCCHC17Q9NP64 241 aaKnown RBP21.85■■□□□ 1.09
COL1A1-207ENST00000486572 BAZ2AQ9UIF9 1905 aaKnown RBP21.84■■□□□ 1.09
COL1A1-207ENST00000486572 A0A0G2JLL6 359 aaPredicted RBP21.84■■□□□ 1.09
COL1A1-207ENST00000486572 TRIM75PA6NK02 468 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 USP17L5A8MUK1 530 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 TRIM6-TRIM34B2RNG4 842 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 BTBD19C9JJ37 291 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 CYP2D6P10635 497 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 GABPAQ06546 454 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 CRHR2Q13324 411 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 PRRT2Q7Z6L0 340 aaPredicted RBP21.84■■□□□ 1.09
COL1A1-207ENST00000486572 TICAM2Q86XR7 235 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 SEC62Q99442 399 aaKnown RBP21.84■■□□□ 1.09
COL1A1-207ENST00000486572 TAOK2Q9UL54 1235 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 ZBTB21Q9ULJ3 1066 aa21.84■■□□□ 1.09
COL1A1-207ENST00000486572 GSG1L2A8MUP6 293 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms