RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 FDPSP14324 419 aaKnown RBP25.3■■□□□ 1.64
TRADD-202ENST00000486556 DPEP1P16444 411 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 POLD1P28340 1107 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 TMEM87AQ8NBN3 555 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 TNKSO95271 1327 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 ROBO3Q96MS0 1386 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 LAMB1P07942 1786 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 CYP2D6P10635 497 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 CSPP1Q1MSJ5 1256 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 MICU3Q86XE3 530 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 CHAMP1Q96JM3 812 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 PSMD1Q99460 953 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 ZNF287Q9HBT7 754 aa25.3■■□□□ 1.64
TRADD-202ENST00000486556 CCDC196A0A1B0GTZ2 297 aa25.29■■□□□ 1.64
TRADD-202ENST00000486556 GOLGA8AA7E2F4 631 aa25.29■■□□□ 1.64
TRADD-202ENST00000486556 PRDM1O75626 825 aa25.29■■□□□ 1.64
TRADD-202ENST00000486556 POLR3DP05423 398 aaPredicted RBP25.29■■□□□ 1.64
TRADD-202ENST00000486556 ADD1P35611 737 aaKnown RBP25.29■■□□□ 1.64
TRADD-202ENST00000486556 MAPKAPK5Q8IW41 473 aa25.29■■□□□ 1.64
TRADD-202ENST00000486556 VPS33BQ9H267 617 aa25.29■■□□□ 1.64
TRADD-202ENST00000486556 USP17L3A6NCW0 530 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 USP17L4A6NCW7 530 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 HDLBPQ00341 1268 aaKnown RBP25.28■■□□□ 1.64
TRADD-202ENST00000486556 FOXD4L6Q3SYB3 417 aaPredicted RBP25.28■■□□□ 1.64
TRADD-202ENST00000486556 SOGA3Q5TF21 947 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 FOXD4L3Q6VB84 417 aaPredicted RBP25.28■■□□□ 1.64
TRADD-202ENST00000486556 USP17L1Q7RTZ2 530 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 TEKT1Q969V4 418 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 ORC3Q9UBD5 711 aaPredicted RBP25.28■■□□□ 1.64
TRADD-202ENST00000486556 KIF13BQ9NQT8 1826 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 DEKP35659 375 aaKnown RBP25.28■■□□□ 1.64
TRADD-202ENST00000486556 AOC3Q16853 763 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 DACT2Q5SW24 774 aa25.28■■□□□ 1.64
TRADD-202ENST00000486556 F8W031 263 aaPredicted RBP25.27■■□□□ 1.64
TRADD-202ENST00000486556 ZBTB7AO95365 584 aa25.27■■□□□ 1.64
TRADD-202ENST00000486556 CDC27P30260 824 aa25.27■■□□□ 1.64
TRADD-202ENST00000486556 RAB11FIP4Q86YS3 637 aa25.27■■□□□ 1.64
TRADD-202ENST00000486556 ENAHQ8N8S7 591 aaPredicted RBP25.27■■□□□ 1.64
TRADD-202ENST00000486556 FAM217BQ9NTX9 383 aaPredicted RBP25.27■■□□□ 1.64
TRADD-202ENST00000486556 FLT1P17948 1338 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 MBD3O95983 291 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 NTRK3Q16288 839 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 CCDC178Q5BJE1 867 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 IFIT1BQ5T764 474 aaKnown RBP25.26■■□□□ 1.63
TRADD-202ENST00000486556 USP48Q86UV5 1035 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 ZNF654Q8IZM8 581 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 KCNQ5Q9NR82 932 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 TSPY2A6NKD2 308 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 PPIP5K2O43314 1243 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 NCLP19338 710 aaKnown RBP25.26■■□□□ 1.63
TRADD-202ENST00000486556 DNM1Q05193 864 aaKnown RBP25.26■■□□□ 1.63
TRADD-202ENST00000486556 FERMT3Q86UX7 667 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 FANCBQ8NB91 859 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 MXD3Q9BW11 206 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 MKNK2Q9HBH9 465 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 PIM2Q9P1W9 311 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 CNPY2Q9Y2B0 182 aa25.26■■□□□ 1.63
TRADD-202ENST00000486556 CALM1P0DP23 149 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 CALM2P0DP24 149 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 CALM3P0DP25 149 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 IFNAR1P17181 557 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 RXRAP19793 462 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 PLCD1P51178 756 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 KRT85P78386 507 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 EVX2Q03828 476 aa25.25■■□□□ 1.63
TRADD-202ENST00000486556 IARSP41252 1262 aaKnown RBP25.24■■□□□ 1.63
TRADD-202ENST00000486556 RTN1Q16799 776 aa25.24■■□□□ 1.63
TRADD-202ENST00000486556 CATIPQ7Z7H3 387 aa25.24■■□□□ 1.63
TRADD-202ENST00000486556 ZDHHC15Q96MV8 337 aa25.24■■□□□ 1.63
TRADD-202ENST00000486556 MYL10Q9BUA6 226 aa25.24■■□□□ 1.63
TRADD-202ENST00000486556 ATF5Q9Y2D1 282 aaPredicted RBP25.24■■□□□ 1.63
TRADD-202ENST00000486556 NAV1Q8NEY1 1877 aa25.24■■□□□ 1.63
TRADD-202ENST00000486556 RESTQ13127 1097 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 ZNF444Q8N0Y2 327 aaPredicted RBP25.23■■□□□ 1.63
TRADD-202ENST00000486556 C8orf76Q96K31 380 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 TCP11L1Q9NUJ3 509 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 STK36Q9NRP7 1315 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 CRKP46108 304 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 SCNN1DP51172 638 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 APOBEC3HQ6NTF7 200 aaKnown RBP25.23■■□□□ 1.63
TRADD-202ENST00000486556 C16orf86Q6ZW13 317 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 DGKHQ86XP1 1220 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 CCDC144CPQ8IYA2 1237 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 FBXO18Q8NFZ0 1043 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 USP40Q9NVE5 1235 aa25.23■■□□□ 1.63
TRADD-202ENST00000486556 SAP30BPQ9UHR5 308 aaKnown RBP25.23■■□□□ 1.63
TRADD-202ENST00000486556 CDK5RAP2Q96SN8 1893 aa25.22■■□□□ 1.63
TRADD-202ENST00000486556 TFAP4Q01664 338 aa25.22■■□□□ 1.63
TRADD-202ENST00000486556 SSRP1Q08945 709 aaKnown RBP25.22■■□□□ 1.63
TRADD-202ENST00000486556 FAM47AQ5JRC9 791 aa25.22■■□□□ 1.63
TRADD-202ENST00000486556 TTC6Q86TZ1 520 aa25.22■■□□□ 1.63
TRADD-202ENST00000486556 DYNLL2Q96FJ2 89 aa25.22■■□□□ 1.63
TRADD-202ENST00000486556 SCAND2PQ9GZW5 306 aaPredicted RBP25.22■■□□□ 1.63
TRADD-202ENST00000486556 GZF1Q9H116 711 aaPredicted RBP25.22■■□□□ 1.63
TRADD-202ENST00000486556 ATL3Q6DD88 541 aa25.21■■□□□ 1.63
TRADD-202ENST00000486556 WASF1Q92558 559 aa25.21■■□□□ 1.63
TRADD-202ENST00000486556 ANKS1AQ92625 1134 aa25.21■■□□□ 1.63
TRADD-202ENST00000486556 GDPD2Q9HCC8 539 aa25.21■■□□□ 1.63
TRADD-202ENST00000486556 SERPINA10Q9UK55 444 aa25.21■■□□□ 1.63
TRADD-202ENST00000486556 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms