RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 LEFTY1O75610 366 aa6.38□□□□□ -1.39
R3HDM1-217ENST00000486532 RNASE1P07998 156 aaKnown RBP6.38□□□□□ -1.39
R3HDM1-217ENST00000486532 FGD1P98174 961 aa6.38□□□□□ -1.39
R3HDM1-217ENST00000486532 WFDC3Q8IUB2 231 aa6.38□□□□□ -1.39
R3HDM1-217ENST00000486532 FRMD6Q96NE9 622 aa6.38□□□□□ -1.39
R3HDM1-217ENST00000486532 ITIH2P19823 946 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 MAPK8P45983 427 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 CLCN7P51798 805 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 TPTE2Q6XPS3 522 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 C3orf58Q8NDZ4 430 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 ZNF507Q8TCN5 953 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 STK35Q8TDR2 534 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 ELMO3Q96BJ8 720 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 MBNL3Q9NUK0 354 aaKnown RBP6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 MAPK8IP1Q9UQF2 711 aa6.37□□□□□ -1.39
R3HDM1-217ENST00000486532 BMP6P22004 513 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 PPM1JQ5JR12 505 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 KSR1Q8IVT5 923 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 FLAD1Q8NFF5 587 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 FOXQ1Q9C009 403 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 PRDM5Q9NQX1 630 aaPredicted RBP6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 LMCD1Q9NZU5 365 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 FAM8A1Q9UBU6 413 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 PCDHA4Q9UN74 947 aa6.36□□□□□ -1.39
R3HDM1-217ENST00000486532 PATL2C9JE40 543 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 ENC1O14682 589 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 LRIG2O94898 1065 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 FMR1Q06787 632 aaKnown RBP eCLIP6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 IKZF1Q13422 519 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 ZBTB37Q5TC79 503 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 DIEXFQ68CQ4 756 aaKnown RBP6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 ZNF746Q6NUN9 644 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 HDXQ7Z353 690 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 BHLHE22Q8NFJ8 381 aaPredicted RBP6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 CCDC120Q96HB5 630 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 ASB16Q96NS5 453 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 PLAGL2Q9UPG8 496 aa6.35□□□□□ -1.39
R3HDM1-217ENST00000486532 DCDC2CA8MYV0 355 aa6.34□□□□□ -1.39
R3HDM1-217ENST00000486532 RING1Q06587 406 aa6.34□□□□□ -1.39
R3HDM1-217ENST00000486532 SV2BQ7L1I2 683 aa6.34□□□□□ -1.39
R3HDM1-217ENST00000486532 COX4I2Q96KJ9 171 aa6.34□□□□□ -1.39
R3HDM1-217ENST00000486532 HEXIM2Q96MH2 286 aaKnown RBP6.34□□□□□ -1.39
R3HDM1-217ENST00000486532 CSADQ9Y600 493 aa6.34□□□□□ -1.39
R3HDM1-217ENST00000486532 DBX1A6NMT0 343 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 LMNB1P20700 586 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 CDK11BP21127 795 aaKnown RBP6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 AFMP43652 599 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 ZP2Q05996 745 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 KCNA1Q09470 495 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 C12orf40Q86WS4 652 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 ZSWIM9Q86XI8 627 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 MFSD2AQ8NA29 543 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 FAM84AQ96KN4 292 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 C12orf49Q9H741 205 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 ADAMTS6Q9UKP5 1117 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 SNCAIPQ9Y6H5 919 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 SHROOM4Q9ULL8 1493 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 CARMIL2Q6F5E8 1435 aa6.33□□□□□ -1.4
R3HDM1-217ENST00000486532 CYP7A1P22680 504 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 KCNMB1Q16558 191 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 PCNX4Q63HM2 1172 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 C22orf34Q6ZV56 151 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 FAM214BQ7L5A3 538 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 SPACA3Q8IXA5 215 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 GRIN3AQ8TCU5 1115 aa6.32□□□□□ -1.4
R3HDM1-217ENST00000486532 FAM155AB1AL88 458 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 CAP2P40123 477 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 CD96P40200 585 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 SFRP5Q5T4F7 317 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 ZNF648Q5T619 568 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 ARMCX6Q7L4S7 300 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 NPAS4Q8IUM7 802 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 OSBPL7Q9BZF2 842 aa6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
R3HDM1-217ENST00000486532 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 LOC105371045A0A1W2PR82 267 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 LRRC10BA6NIK2 292 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 PAGE1O75459 146 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 EOMESO95936 686 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 NTF4P34130 210 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 NKPD1Q17RQ9 610 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 PPP1R16BQ96T49 567 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 TTF2Q9UNY4 1162 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 CCDC9Q9Y3X0 531 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 TACC3Q9Y6A5 838 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 U3KQE9 123 aa6.3□□□□□ -1.4
R3HDM1-217ENST00000486532 PRAMEF27A3QJZ7 478 aa6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 FBXO24O75426 580 aa6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 RPS26P62854 115 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 KRTAP19-4Q3LI73 84 aa6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 HID1Q8IV36 788 aa6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 WNT10AQ9GZT5 417 aa6.29□□□□□ -1.4
R3HDM1-217ENST00000486532 ZNF865P0CJ78 1059 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms