RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 PIM2Q9P1W9 311 aa9.16□□□□□ -0.94
LTN1-206ENST00000486427 MINDY4BA8MYZ0 360 aa9.15□□□□□ -0.94
LTN1-206ENST00000486427 LMNB2Q03252 620 aa9.15□□□□□ -0.94
LTN1-206ENST00000486427 OGFOD3Q6PK18 319 aa9.15□□□□□ -0.94
LTN1-206ENST00000486427 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
LTN1-206ENST00000486427 FBRSQ9HAH7 460 aa9.15□□□□□ -0.94
LTN1-206ENST00000486427 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
LTN1-206ENST00000486427 KRTAP9-6A0A140TA67 174 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 COBLO75128 1261 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 LEFTY1O75610 366 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 FAM87AP0C7U9 286 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 FAM160A1Q05DH4 1040 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 TSNAXIP1Q2TAA8 658 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 TMEM87AQ8NBN3 555 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 METTL22Q9BUU2 404 aaPredicted RBP9.14□□□□□ -0.95
LTN1-206ENST00000486427 WNT10AQ9GZT5 417 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 BCL11AQ9H165 835 aa9.14□□□□□ -0.95
LTN1-206ENST00000486427 FAM221AA4D161 298 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 F13A1P00488 732 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 GARTP22102 1010 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 ZNF507Q8TCN5 953 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 DUSP23Q9BVJ7 150 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 ZFP64Q9NPA5 681 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 GGT7Q9UJ14 662 aa9.13□□□□□ -0.95
LTN1-206ENST00000486427 CILPO75339 1184 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 FOSL1P15407 271 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 GRK4P32298 578 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 RPL6Q02878 288 aaKnown RBP9.12□□□□□ -0.95
LTN1-206ENST00000486427 PWP1Q13610 501 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 NKG7Q16617 165 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
LTN1-206ENST00000486427 DUSP27Q5VZP5 1158 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 CDC37L1Q7L3B6 337 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 CCDC84Q86UT8 332 aaPredicted RBP9.12□□□□□ -0.95
LTN1-206ENST00000486427 TOP6BLQ8N6T0 577 aa9.12□□□□□ -0.95
LTN1-206ENST00000486427 UNCXA6NJT0 531 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 KIAA1324LA8MWY0 1029 aaPredicted RBP9.11□□□□□ -0.95
LTN1-206ENST00000486427 RECKO95980 971 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 SPINK2P20155 84 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 GRIK1P39086 918 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 ETF1P62495 437 aaKnown RBP9.11□□□□□ -0.95
LTN1-206ENST00000486427 CYP27A1Q02318 531 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 SLBPQ14493 270 aaKnown RBP eCLIP9.11□□□□□ -0.95
LTN1-206ENST00000486427 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
LTN1-206ENST00000486427 ARMCX6Q7L4S7 300 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 GOLM1Q8NBJ4 401 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 GATAD2BQ8WXI9 593 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 LRRC4CQ9HCJ2 640 aa9.11□□□□□ -0.95
LTN1-206ENST00000486427 CYP26A1O43174 497 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 MSMPQ1L6U9 139 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 SNAP47Q5SQN1 464 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 HS2ST1Q7LGA3 356 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 KCT2Q8NC54 265 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 PCMTD2Q9NV79 361 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 CCDC9Q9Y3X0 531 aaKnown RBP9.1□□□□□ -0.95
LTN1-206ENST00000486427 U3KQE9 123 aa9.1□□□□□ -0.95
LTN1-206ENST00000486427 ADAMTS4O75173 837 aa9.09□□□□□ -0.95
LTN1-206ENST00000486427 FBXL19Q6PCT2 694 aa9.09□□□□□ -0.95
LTN1-206ENST00000486427 FBXO27Q8NI29 283 aa9.09□□□□□ -0.95
LTN1-206ENST00000486427 PRDM10Q9NQV6 1147 aa9.09□□□□□ -0.95
LTN1-206ENST00000486427 CORINQ9Y5Q5 1042 aa9.09□□□□□ -0.95
LTN1-206ENST00000486427 TACC3Q9Y6A5 838 aa9.09□□□□□ -0.95
LTN1-206ENST00000486427 VAMP1P23763 118 aa9.08□□□□□ -0.96
LTN1-206ENST00000486427 FANCCQ00597 558 aa9.08□□□□□ -0.96
LTN1-206ENST00000486427 CYP27C1Q4G0S4 372 aa9.08□□□□□ -0.96
LTN1-206ENST00000486427 DTX1Q86Y01 620 aa9.08□□□□□ -0.96
LTN1-206ENST00000486427 MRRFQ96E11 262 aaKnown RBP9.08□□□□□ -0.96
LTN1-206ENST00000486427 KCNQ5Q9NR82 932 aa9.08□□□□□ -0.96
LTN1-206ENST00000486427 KIAA1522Q9P206 1035 aaPredicted RBP9.08□□□□□ -0.96
LTN1-206ENST00000486427 ZC3H7BQ9UGR2 993 aaKnown RBP9.08□□□□□ -0.96
LTN1-206ENST00000486427 LRIG2O94898 1065 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 PGRP06401 933 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 ZNF76P36508 570 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 EIF4A3P38919 411 aaKnown RBP9.07□□□□□ -0.96
LTN1-206ENST00000486427 FAM214BQ7L5A3 538 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 HID1Q8IV36 788 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 FAM181AQ8N9Y4 354 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 TJP2Q9UDY2 1190 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 ADAMTS1Q9UHI8 967 aa9.07□□□□□ -0.96
LTN1-206ENST00000486427 POLR3KQ9Y2Y1 108 aaPredicted RBP9.07□□□□□ -0.96
LTN1-206ENST00000486427 SLITRK5O94991 958 aa9.06□□□□□ -0.96
LTN1-206ENST00000486427 BPNT1O95861 308 aa9.06□□□□□ -0.96
LTN1-206ENST00000486427 CAP2P40123 477 aa9.06□□□□□ -0.96
LTN1-206ENST00000486427 FAM196AQ6ZSG2 479 aa9.06□□□□□ -0.96
LTN1-206ENST00000486427 HEXIM2Q96MH2 286 aaKnown RBP9.06□□□□□ -0.96
LTN1-206ENST00000486427 FOXQ1Q9C009 403 aa9.06□□□□□ -0.96
LTN1-206ENST00000486427 RBAK-RBAKDNI3L0D1 243 aa9.05□□□□□ -0.96
LTN1-206ENST00000486427 TLR3O15455 904 aaKnown RBP9.05□□□□□ -0.96
LTN1-206ENST00000486427 GREM1O60565 184 aa9.05□□□□□ -0.96
LTN1-206ENST00000486427 EOMESO95936 686 aa9.05□□□□□ -0.96
LTN1-206ENST00000486427 PRAMEF13Q5VWM6 474 aa9.05□□□□□ -0.96
LTN1-206ENST00000486427 ZNF296Q8WUU4 475 aaPredicted RBP9.05□□□□□ -0.96
LTN1-206ENST00000486427 DPH2Q9BQC3 489 aaPredicted RBP9.05□□□□□ -0.96
LTN1-206ENST00000486427 CST3P01034 146 aaPredicted RBP9.04□□□□□ -0.96
LTN1-206ENST00000486427 CRKP46108 304 aa9.04□□□□□ -0.96
LTN1-206ENST00000486427 MPP2Q14168 576 aa9.04□□□□□ -0.96
LTN1-206ENST00000486427 ACSF2Q96CM8 615 aaPredicted RBP9.04□□□□□ -0.96
LTN1-206ENST00000486427 METTL5Q9NRN9 209 aaKnown RBP9.04□□□□□ -0.96
LTN1-206ENST00000486427 SUPT16HQ9Y5B9 1047 aaKnown RBP9.04□□□□□ -0.96
LTN1-206ENST00000486427 CNTNAP4Q9C0A0 1308 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms