RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 DACT2Q5SW24 774 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 CTR9Q6PD62 1173 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 SYNE3Q6ZMZ3 975 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 CYB5R4Q7L1T6 521 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 CHST3Q7LGC8 479 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 TMEM87AQ8NBN3 555 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 ZSWIM5Q9P217 1185 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 GJA3Q9Y6H8 435 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 GAKO14976 1311 aa13.82□□□□□ -0.2
ERGIC3-215ENST00000486268 PTPDC1A2A3K4 754 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 USP17L3A6NCW0 530 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 USP17L4A6NCW7 530 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 CCDC69A6NI79 296 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 GOLGA8BA8MQT2 603 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 POTECB2RU33 542 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 IFIT3O14879 490 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 PDE4BQ07343 736 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 STRIP1Q5VSL9 837 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 USP17L1Q7RTZ2 530 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 GPC2Q8N158 579 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 CERS5Q8N5B7 392 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 MRIQ9BWK5 157 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 LY9Q9HBG7 655 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 BRPF3Q9ULD4 1205 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 ADAMTSL1Q8N6G6 1762 aa13.81□□□□□ -0.2
ERGIC3-215ENST00000486268 SHTN1A0MZ66 631 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 USP17L21D6R901 530 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 CPLX1O14810 134 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 ZBTB43O43298 467 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 MBD3O95983 291 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 USP5P45974 858 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 METAP2P50579 478 aaKnown RBP eCLIP13.8□□□□□ -0.23e-8■■□□□ 14.5
ERGIC3-215ENST00000486268 SCNN1DP51172 638 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 TNIP1Q15025 636 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 CCDC178Q5BJE1 867 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 RSBN1LQ6PCB5 846 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 APOA5Q6Q788 366 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 NFXL1Q6ZNB6 911 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 IQCA1Q86XH1 822 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 GMLQ99445 158 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 UBAC1Q9BSL1 405 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 TOMM22Q9NS69 142 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 NAP1L2Q9ULW6 460 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 HPS5Q9UPZ3 1129 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 ROBO3Q96MS0 1386 aa13.8□□□□□ -0.2
ERGIC3-215ENST00000486268 CCDC196A0A1B0GTZ2 297 aa13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 VPS37CA5D8V6 355 aaPredicted RBP13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 H3BQV1 296 aa13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 CTDNEP1O95476 244 aa13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 WTAPQ15007 396 aa13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 GRIK5Q16478 980 aa13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 DPY19L2Q6NUT2 758 aa13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 ISY1Q9ULR0 285 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.79□□□□□ -0.2
ERGIC3-215ENST00000486268 JAK2O60674 1132 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 BTDP43251 543 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 HDLBPQ00341 1268 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 DIXDC1Q155Q3 683 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 RRP12Q5JTH9 1297 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 C12orf60Q5U649 245 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 FOXD4L5Q5VV16 416 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 ATL3Q6DD88 541 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 HHIPL2Q6UWX4 724 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 FOXD4L4Q8WXT5 416 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 NMRK2Q9NPI5 230 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 MCM9Q9NXL9 1143 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 TAOK2Q9UL54 1235 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 TACC3Q9Y6A5 838 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 LAMB1P07942 1786 aa13.78□□□□□ -0.2
ERGIC3-215ENST00000486268 CALM1P0DP23 149 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 CALM2P0DP24 149 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 CALM3P0DP25 149 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 KRT85P78386 507 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 AGBL3Q8NEM8 1001 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 SH3RF3Q8TEJ3 882 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 ZSCAN10Q96SZ4 725 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 RRAGCQ9HB90 399 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 STK36Q9NRP7 1315 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 GPRC5DQ9NZD1 345 aa13.77□□□□□ -0.21
ERGIC3-215ENST00000486268 GOLGA8AA7E2F4 631 aa13.76□□□□□ -0.21
ERGIC3-215ENST00000486268 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-215ENST00000486268 EPS15P42566 896 aa13.76□□□□□ -0.21
ERGIC3-215ENST00000486268 SEC23AQ15436 765 aa13.76□□□□□ -0.21
ERGIC3-215ENST00000486268 CDC37L1Q7L3B6 337 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms