RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NOL9Q5SY16 702 aaKnown RBP10.62□□□□□ -0.71
XRN1-212ENST00000486211 DCAF15Q66K64 600 aa10.62□□□□□ -0.71
XRN1-212ENST00000486211 MIGA2Q7L4E1 593 aa10.62□□□□□ -0.71
XRN1-212ENST00000486211 TDRD7Q8NHU6 1098 aaKnown RBP10.62□□□□□ -0.71
XRN1-212ENST00000486211 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
XRN1-212ENST00000486211 MAP3K2Q9Y2U5 619 aa10.62□□□□□ -0.71
XRN1-212ENST00000486211 LAS1LQ9Y4W2 734 aaKnown RBP10.62□□□□□ -0.71
XRN1-212ENST00000486211 MAST2Q6P0Q8 1798 aa10.62□□□□□ -0.71
XRN1-212ENST00000486211 LTBP2Q14767 1821 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 CXCL11O14625 94 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 CASP7P55210 303 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 MAP3K21Q5TCX8 1036 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 FKBP1CQ5VVH2 108 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 UBE3BQ7Z3V4 1068 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 COA7Q96BR5 231 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 HOOK2Q96ED9 719 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 SLC45A1Q9Y2W3 748 aa10.61□□□□□ -0.71
XRN1-212ENST00000486211 A0A0G2JLL6 359 aaPredicted RBP10.6□□□□□ -0.71
XRN1-212ENST00000486211 NEURL1BA8MQ27 555 aa10.6□□□□□ -0.71
XRN1-212ENST00000486211 PTPN5P54829 565 aa10.6□□□□□ -0.71
XRN1-212ENST00000486211 HDLBPQ00341 1268 aaKnown RBP10.6□□□□□ -0.71
XRN1-212ENST00000486211 MFSD10Q14728 455 aa10.6□□□□□ -0.71
XRN1-212ENST00000486211 CWF19L2Q2TBE0 894 aaKnown RBP10.6□□□□□ -0.71
XRN1-212ENST00000486211 PRRT2Q7Z6L0 340 aaPredicted RBP10.6□□□□□ -0.71
XRN1-212ENST00000486211 SPRYD3Q8NCJ5 442 aa10.6□□□□□ -0.71
XRN1-212ENST00000486211 ZDHHC16Q969W1 377 aa10.6□□□□□ -0.71
XRN1-212ENST00000486211 GJD2Q9UKL4 321 aa10.6□□□□□ -0.71
XRN1-212ENST00000486211 ARIH1Q9Y4X5 557 aaPredicted RBP10.6□□□□□ -0.71
XRN1-212ENST00000486211 PLXNB2O15031 1838 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 PTPRFP10586 1907 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 GOLGA8CPA6NN73 597 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 SMAD3P84022 425 aaKnown RBP10.59□□□□□ -0.71
XRN1-212ENST00000486211 SHHQ15465 462 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 C9orf50Q5SZB4 431 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 APOBEC3HQ6NTF7 200 aaKnown RBP10.59□□□□□ -0.71
XRN1-212ENST00000486211 TRIB2Q92519 343 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 ZDHHC15Q96MV8 337 aa10.59□□□□□ -0.71
XRN1-212ENST00000486211 LBHD1Q9BQE6 289 aaPredicted RBP10.59□□□□□ -0.71
XRN1-212ENST00000486211 PI4KAP2A4QPH2 592 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 BHMG1C9JSJ3 638 aaPredicted RBP10.58□□□□□ -0.72
XRN1-212ENST00000486211 DDX58O95786 925 aaKnown RBP10.58□□□□□ -0.72
XRN1-212ENST00000486211 FAM110CQ1W6H9 321 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 KSR2Q6VAB6 950 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 FASTKD5Q7L8L6 764 aaKnown RBP10.58□□□□□ -0.72
XRN1-212ENST00000486211 ANKRD13CQ8N6S4 541 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 PI4KAP1Q8N8J0 262 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 MBIPQ9NS73 344 aa10.58□□□□□ -0.72
XRN1-212ENST00000486211 ANKRD18BA2A2Z9 1011 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 GYG1P46976 350 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 NEUROD2Q15784 382 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 ADAMTS19Q8TE59 1207 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 SMCR8Q8TEV9 937 aaPredicted RBP10.57□□□□□ -0.72
XRN1-212ENST00000486211 TEKT1Q969V4 418 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 FAM84BQ96KN1 310 aaPredicted RBP10.57□□□□□ -0.72
XRN1-212ENST00000486211 TMOD2Q9NZR1 351 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 AFG3L2Q9Y4W6 797 aa10.57□□□□□ -0.72
XRN1-212ENST00000486211 ATRNL1Q5VV63 1379 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 ZNF853P0CG23 659 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
XRN1-212ENST00000486211 ATXN2LQ8WWM7 1075 aaKnown RBP10.56□□□□□ -0.72
XRN1-212ENST00000486211 MRIQ9BWK5 157 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 ZHX2Q9Y6X8 837 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 NCOR1O75376 2440 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 PHIPQ8WWQ0 1821 aa10.56□□□□□ -0.72
XRN1-212ENST00000486211 AK9Q5TCS8 1911 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 PHF20L1A8MW92 1017 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 ELL2O00472 640 aaPredicted RBP10.55□□□□□ -0.72
XRN1-212ENST00000486211 PTPRAP18433 802 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 HIBADHP31937 336 aaKnown RBP10.55□□□□□ -0.72
XRN1-212ENST00000486211 NEXNQ0ZGT2 675 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 GCKRQ14397 625 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 GRIN2CQ14957 1233 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 FAM151AQ8WW52 585 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 SNX27Q96L92 541 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 ASB2Q96Q27 587 aa10.55□□□□□ -0.72
XRN1-212ENST00000486211 UHRF1Q96T88 793 aaPredicted RBP10.55□□□□□ -0.72
XRN1-212ENST00000486211 BDP1A6H8Y1 2624 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 PIEZO1Q92508 2521 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 FRMPD3Q5JV73 1810 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 PLIN1O60240 522 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 FOXO4P98177 505 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 TREML2Q5T2D2 321 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 WNT2BQ93097 391 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 AGTPBP1Q9UPW5 1226 aa10.54□□□□□ -0.72
XRN1-212ENST00000486211 CCND3P30281 292 aaPredicted RBP10.53□□□□□ -0.72
XRN1-212ENST00000486211 CACNB2Q08289 660 aaPredicted RBP10.53□□□□□ -0.72
XRN1-212ENST00000486211 NFIAQ12857 509 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 IFIT5Q13325 482 aaKnown RBP10.53□□□□□ -0.72
XRN1-212ENST00000486211 UBE4AQ14139 1066 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 HHIPL2Q6UWX4 724 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 THSD4Q6ZMP0 1018 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 FBXO33Q7Z6M2 555 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 C8orf58Q8NAV2 365 aa10.53□□□□□ -0.72
XRN1-212ENST00000486211 ZNF594Q96JF6 807 aaPredicted RBP10.53□□□□□ -0.72
XRN1-212ENST00000486211 C1QTNF1Q9BXJ1 281 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms