RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 IGDCC4Q8TDY8 1250 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
COL9A1-207ENST00000486080 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 BRPF3Q9ULD4 1205 aa17■□□□□ 0.31
COL9A1-207ENST00000486080 ROBO3Q96MS0 1386 aa16.99■□□□□ 0.31
COL9A1-207ENST00000486080 SH2B2O14492 632 aaPredicted RBP16.99■□□□□ 0.31
COL9A1-207ENST00000486080 ORC4O43929 436 aa16.99■□□□□ 0.31
COL9A1-207ENST00000486080 RANBP6O60518 1105 aaKnown RBP16.99■□□□□ 0.31
COL9A1-207ENST00000486080 SLC44A5Q8NCS7 719 aa16.99■□□□□ 0.31
COL9A1-207ENST00000486080 ESR2Q92731 530 aa16.99■□□□□ 0.31
COL9A1-207ENST00000486080 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
COL9A1-207ENST00000486080 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 PCP11498 1178 aaKnown RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 LMNB1P20700 586 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 EIF6P56537 245 aaKnown RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 PDE4BQ07343 736 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 TMEM67Q5HYA8 995 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 OSBPL5Q9H0X9 879 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 FAM198AQ9UFP1 575 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 NAP1L2Q9ULW6 460 aaPredicted RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 IFIT3O14879 490 aaKnown RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 PDIA3P30101 505 aaKnown RBP16.98■□□□□ 0.31
COL9A1-207ENST00000486080 TCP10Q12799 353 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 DLGAP5Q15398 846 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 FAM47AQ5JRC9 791 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 TMEM87BQ96K49 555 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 LY9Q9HBG7 655 aa16.98■□□□□ 0.31
COL9A1-207ENST00000486080 KLF18A0A0U1RQI7 1052 aa16.97■□□□□ 0.31
COL9A1-207ENST00000486080 GMPSP49915 693 aaPredicted RBP16.97■□□□□ 0.31
COL9A1-207ENST00000486080 EVCP57679 992 aa16.97■□□□□ 0.31
COL9A1-207ENST00000486080 RAB11FIP4Q86YS3 637 aa16.97■□□□□ 0.31
COL9A1-207ENST00000486080 IDI2Q9BXS1 227 aa16.97■□□□□ 0.31
COL9A1-207ENST00000486080 PFKFB2O60825 505 aa16.96■□□□□ 0.31
COL9A1-207ENST00000486080 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
COL9A1-207ENST00000486080 SCRN1Q12765 414 aa16.96■□□□□ 0.31
COL9A1-207ENST00000486080 GTF3C6Q969F1 213 aa16.96■□□□□ 0.31
COL9A1-207ENST00000486080 ZNF274Q96GC6 653 aaPredicted RBP16.96■□□□□ 0.31
COL9A1-207ENST00000486080 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
COL9A1-207ENST00000486080 CHMP5Q9NZZ3 219 aa16.96■□□□□ 0.31
COL9A1-207ENST00000486080 SIPA1L1O43166 1804 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 CLRN2A0PK11 232 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 CDK8P49336 464 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 C16orf86Q6ZW13 317 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 UBAC1Q9BSL1 405 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 MKNK2Q9HBH9 465 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 NCOA5Q9HCD5 579 aaKnown RBP16.96■□□□□ 0.3
COL9A1-207ENST00000486080 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.3
COL9A1-207ENST00000486080 MYH8P13535 1937 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 NMT2O60551 498 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 RPS12P25398 132 aaKnown RBP16.95■□□□□ 0.3
COL9A1-207ENST00000486080 SH3BP5LQ7L8J4 393 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 TTC6Q86TZ1 520 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 MTMR14Q8NCE2 650 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 ZBED3Q96IU2 234 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-207ENST00000486080 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-207ENST00000486080 MYOZ2Q9NPC6 264 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 ZNF70Q9UC06 446 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-207ENST00000486080 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.95■□□□□ 0.3
COL9A1-207ENST00000486080 TNKSO95271 1327 aa16.95■□□□□ 0.3
COL9A1-207ENST00000486080 DDTLA6NHG4 134 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-207ENST00000486080 GOLGA8BA8MQT2 603 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 EGFRP00533 1210 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 SLURP2P0DP57 97 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 RASA1P20936 1047 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 LIFRP42702 1097 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 ZNF280AP59817 542 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-207ENST00000486080 WTAPQ15007 396 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 SART3Q15020 963 aaKnown RBP16.94■□□□□ 0.3
COL9A1-207ENST00000486080 SEC23AQ15436 765 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 NFXL1Q6ZNB6 911 aa16.94■□□□□ 0.3
COL9A1-207ENST00000486080 ENAHQ8N8S7 591 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-207ENST00000486080 CIZ1Q9ULV3 898 aaPredicted RBP16.94■□□□□ 0.3
COL9A1-207ENST00000486080 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 TCP10L2B9ZVM9 353 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
COL9A1-207ENST00000486080 TFAP4Q01664 338 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 GABPAQ06546 454 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 PKP1Q13835 747 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 NBPF9Q3BBW0 867 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 SPDYE2Q495Y8 402 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 RBM26Q5T8P6 1007 aaKnown RBP16.93■□□□□ 0.3
COL9A1-207ENST00000486080 APOA5Q6Q788 366 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 SGMS1Q86VZ5 419 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 MICALL2Q8IY33 904 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 SMC3Q9UQE7 1217 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 ERICH2A1L162 156 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 WNT10BO00744 389 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 RXRAP19793 462 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 GJB2P29033 226 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 IQCA1Q86XH1 822 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 DPF2Q92785 391 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 MYL10Q9BUA6 226 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 RNF181Q9P0P0 153 aa16.93■□□□□ 0.3
COL9A1-207ENST00000486080 CNOT7Q9UIV1 285 aaKnown RBP16.93■□□□□ 0.3
COL9A1-207ENST00000486080 CCDC69A6NI79 296 aa16.92■□□□□ 0.3
COL9A1-207ENST00000486080 JAK2O60674 1132 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms