RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 PRDM11Q9NQV5 511 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 NID2Q14112 1375 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 IFIT3O14879 490 aaKnown RBP25.8■■□□□ 1.72
CLN5-202ENST00000485938 PTPREP23469 700 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 GUCY1A2P33402 732 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 TMCO3Q6UWJ1 677 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 NLRP10Q86W26 655 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 DNAJC10Q8IXB1 793 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 TC2NQ8N9U0 490 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 NFE2L3Q9Y4A8 694 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 TACC3Q9Y6A5 838 aa25.8■■□□□ 1.72
CLN5-202ENST00000485938 STX10O60499 249 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 SARSP49591 514 aaKnown RBP25.79■■□□□ 1.72
CLN5-202ENST00000485938 MLKLQ8NB16 471 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 COL5A2P05997 1499 aaPredicted RBP25.79■■□□□ 1.72
CLN5-202ENST00000485938 GOLGA6L9A6NEM1 432 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 PATL2C9JE40 543 aaKnown RBP25.79■■□□□ 1.72
CLN5-202ENST00000485938 PRR29P0C7W0 189 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 GPTP24298 496 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 CTDSPL2Q05D32 466 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 HLFQ16534 295 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 SPECC1LQ69YQ0 1117 aa25.79■■□□□ 1.72
CLN5-202ENST00000485938 DIS3L2Q8IYB7 885 aaKnown RBP25.79■■□□□ 1.72
CLN5-202ENST00000485938 ENOX1Q8TC92 643 aaKnown RBP25.79■■□□□ 1.72
CLN5-202ENST00000485938 NOL10Q9BSC4 688 aaKnown RBP25.79■■□□□ 1.72
CLN5-202ENST00000485938 CHD4Q14839 1912 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 TPM1P09493 284 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 UQCRFS1P1P0C7P4 283 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 MORC3Q14149 939 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 IFNL3Q8IZI9 196 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 WDR24Q96S15 920 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 TOGARAM1Q9Y4F4 1720 aa25.78■■□□□ 1.72
CLN5-202ENST00000485938 POLR2DO15514 142 aaKnown RBP25.77■■□□□ 1.72
CLN5-202ENST00000485938 SAFBQ15424 915 aaKnown RBP eCLIP25.77■■□□□ 1.72
CLN5-202ENST00000485938 BRINP3Q76B58 766 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 PDILTQ8N807 584 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 TEX13AQ9BXU3 409 aaPredicted RBP25.77■■□□□ 1.72
CLN5-202ENST00000485938 TMOD3Q9NYL9 352 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 SERTAD1Q9UHV2 236 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 MAP3K9P80192 1104 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 TOGARAM2Q6ZUX3 1019 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 FAM177A1Q8N128 213 aaPredicted RBP25.77■■□□□ 1.72
CLN5-202ENST00000485938 NAPBQ9H115 298 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 KCNJ14Q9UNX9 436 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 MYH3P11055 1940 aa25.77■■□□□ 1.72
CLN5-202ENST00000485938 MED15Q96RN5 788 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 FOXP1Q9H334 677 aaPredicted RBP25.76■■□□□ 1.71
CLN5-202ENST00000485938 DACH1Q9UI36 760 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 CDK11BP21127 795 aaKnown RBP25.76■■□□□ 1.71
CLN5-202ENST00000485938 CASQ1P31415 396 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 ADKP55263 362 aaKnown RBP25.76■■□□□ 1.71
CLN5-202ENST00000485938 GNG11P61952 73 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 ZNF827Q17R98 1081 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 RILPL1Q5EBL4 403 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 SMARCE1Q969G3 411 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 CARD10Q9BWT7 1032 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 CNNM2Q9H8M5 875 aa25.76■■□□□ 1.71
CLN5-202ENST00000485938 TIAM2Q8IVF5 1701 aa25.75■■□□□ 1.71
CLN5-202ENST00000485938 TRMT44Q8IYL2 757 aaKnown RBP25.75■■□□□ 1.71
CLN5-202ENST00000485938 ZNF579Q8NAF0 562 aaKnown RBP25.75■■□□□ 1.71
CLN5-202ENST00000485938 IRS4O14654 1257 aaPredicted RBP25.75■■□□□ 1.71
CLN5-202ENST00000485938 MBD4O95243 580 aa25.75■■□□□ 1.71
CLN5-202ENST00000485938 AKNAD1Q5T1N1 836 aa25.75■■□□□ 1.71
CLN5-202ENST00000485938 TRIML1Q8N9V2 468 aa25.75■■□□□ 1.71
CLN5-202ENST00000485938 ASAP1Q9ULH1 1129 aa25.75■■□□□ 1.71
CLN5-202ENST00000485938 CCDC66A2RUB6 948 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 TRIM22Q8IYM9 498 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 GRAMD1CQ8IYS0 662 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 KRT23Q9C075 422 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 PCDHB6Q9Y5E3 794 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 MRFAP1Q9Y605 127 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 RTN1Q16799 776 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 NUTM2AQ8IVF1 878 aaPredicted RBP25.74■■□□□ 1.71
CLN5-202ENST00000485938 KIFC2Q96AC6 838 aa25.74■■□□□ 1.71
CLN5-202ENST00000485938 ACTN4O43707 911 aaKnown RBP25.73■■□□□ 1.71
CLN5-202ENST00000485938 STARD3NLO95772 234 aa25.73■■□□□ 1.71
CLN5-202ENST00000485938 FGFR2P21802 821 aa25.73■■□□□ 1.71
CLN5-202ENST00000485938 PUM3Q15397 648 aaKnown RBP25.73■■□□□ 1.71
CLN5-202ENST00000485938 RAI14Q9P0K7 980 aa25.73■■□□□ 1.71
CLN5-202ENST00000485938 SRPRBQ9Y5M8 271 aaKnown RBP25.73■■□□□ 1.71
CLN5-202ENST00000485938 GSG1L2A8MUP6 293 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 ATP8B1O43520 1251 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 SEC31AO94979 1220 aaKnown RBP25.72■■□□□ 1.71
CLN5-202ENST00000485938 MAGEB6Q8N7X4 407 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 SPATA5Q8NB90 893 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 SPATA20Q8TB22 786 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 LPIN2Q92539 896 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 ARMT1Q9H993 441 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 SAMSN1Q9NSI8 373 aaKnown RBP25.72■■□□□ 1.71
CLN5-202ENST00000485938 NR1I3Q14994 352 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 MFSD6Q6ZSS7 791 aa25.72■■□□□ 1.71
CLN5-202ENST00000485938 CYP2C19P33261 490 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 PLCD1P51178 756 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 NR5A1Q13285 461 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 RSRC2Q7L4I2 434 aaKnown RBP25.71■■□□□ 1.71
CLN5-202ENST00000485938 CRACR2BQ8N4Y2 399 aaPredicted RBP25.71■■□□□ 1.71
CLN5-202ENST00000485938 GPR161Q8N6U8 529 aaKnown RBP25.71■■□□□ 1.71
CLN5-202ENST00000485938 EPC1Q9H2F5 836 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 SEC31BQ9NQW1 1179 aa25.71■■□□□ 1.71
CLN5-202ENST00000485938 ARAP2Q8WZ64 1704 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms