RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 CHRDQ9H2X0 955 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 GNL3LQ9NVN8 582 aaKnown RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 BSDC1Q9NW68 430 aaPredicted RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 SWAP70Q9UH65 585 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 TTF2Q9UNY4 1162 aaKnown RBP5.69□□□□□ -1.5
RTN4-213ENST00000485749 FRMD4BQ9Y2L6 1034 aa5.69□□□□□ -1.5
RTN4-213ENST00000485749 PPP1R12AO14974 1030 aaPredicted RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 ZNF500O60304 480 aaPredicted RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 GREM1O60565 184 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 CDC27P30260 824 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 CABP4P57796 275 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 PRPF40BQ6NWY9 871 aaKnown RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 ACAD11Q709F0 780 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 SV2BQ7L1I2 683 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 C3orf58Q8NDZ4 430 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 GLIS3Q8NEA6 775 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 OR13H1Q8NG92 308 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 GIMAP7Q8NHV1 300 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 ZNF296Q8WUU4 475 aaPredicted RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 EAF1Q96JC9 268 aaPredicted RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 SCYL1Q96KG9 808 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 NAP1L4Q99733 375 aaKnown RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 SENP7Q9BQF6 1050 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 CCDC113Q9H0I3 377 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 SPC25Q9HBM1 224 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 IFT57Q9NWB7 429 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 TMEM63CQ9P1W3 806 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 PRKAG3Q9UGI9 489 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 FBXO9Q9UK97 447 aaPredicted RBP5.68□□□□□ -1.5
RTN4-213ENST00000485749 EFR3BQ9Y2G0 817 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 NUB1Q9Y5A7 615 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 COL4A3BPQ9Y5P4 624 aa5.68□□□□□ -1.5
RTN4-213ENST00000485749 ROBO2Q9HCK4 1378 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 EPB41L2O43491 1005 aaKnown RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 DNAJC6O75061 913 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 EDN3P14138 238 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 GBP2P32456 591 aaPredicted RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 ETFBP38117 255 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 GP2P55259 537 aaKnown RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 NFIAQ12857 509 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 CCDC85BQ15834 202 aaPredicted RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 DUOXA2Q1HG44 320 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 ARSHQ5FYA8 562 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 CEP135Q66GS9 1140 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 AGGF1Q8N302 714 aaeCLIP5.67□□□□□ -1.5
RTN4-213ENST00000485749 WNT8BQ93098 351 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 TRIM44Q96DX7 344 aaPredicted RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 FMNL2Q96PY5 1086 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 DEPDC7Q96QD5 511 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 DBNDD2Q9BQY9 259 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 SLKQ9H2G2 1235 aaPredicted RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 GINM1Q9NU53 330 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 ABI2Q9NYB9 513 aaPredicted RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 TRIM33Q9UPN9 1127 aa5.67□□□□□ -1.5
RTN4-213ENST00000485749 R3HCC1Q9Y3T6 440 aaKnown RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 SUPT16HQ9Y5B9 1047 aaKnown RBP5.67□□□□□ -1.5
RTN4-213ENST00000485749 LINC01387J3KSC0 135 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 EREGO14944 169 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 PTPRAP18433 802 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 LMOD3Q0VAK6 560 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 HDAC1Q13547 482 aaPredicted RBP5.66□□□□□ -1.5
RTN4-213ENST00000485749 RASA3Q14644 834 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 TNNI3KQ59H18 835 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 RNF43Q68DV7 783 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 FILIP1Q7Z7B0 1213 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 C11orf96Q7Z7L8 435 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 C1orf127Q8N9H9 656 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 RHOVQ96L33 236 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 RPS6KC1Q96S38 1066 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 PCDH12Q9NPG4 1184 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 SNTG2Q9NY99 539 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 HIF3AQ9Y2N7 669 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 MSRB2Q9Y3D2 182 aa5.66□□□□□ -1.5
RTN4-213ENST00000485749 A0A1W2PP55 124 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 MINDY4BA8MYZ0 360 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 WNT11O96014 354 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 TGFB1P01137 390 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 S100BP04271 92 aaPredicted RBP5.65□□□□□ -1.5
RTN4-213ENST00000485749 POLR3DP05423 398 aaPredicted RBP5.65□□□□□ -1.5
RTN4-213ENST00000485749 CES1P23141 567 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 POLD1P28340 1107 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 GYS2P54840 703 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 RHBDL3P58872 404 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 PCNX4Q63HM2 1172 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 ANKRD34AQ69YU3 496 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 FBXL19Q6PCT2 694 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 CLEC10AQ8IUN9 316 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 PDILTQ8N807 584 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 CEP120Q8N960 986 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 CPLX3Q8WVH0 158 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 MYRFLQ96LU7 910 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 CEP44Q9C0F1 390 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 LACRTQ9GZZ8 138 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 SEC31BQ9NQW1 1179 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 CNTN3Q9P232 1028 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 TCEAL9Q9UHQ7 104 aa5.65□□□□□ -1.5
RTN4-213ENST00000485749 G3BP2Q9UN86 482 aaKnown RBP5.65□□□□□ -1.5
RTN4-213ENST00000485749 TMEM238LA0A1B0GVL6 79 aa5.64□□□□□ -1.51
RTN4-213ENST00000485749 CCDC189A1A4V9 331 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms