RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 ENTPD3O75355 529 aa22.58■■□□□ 1.21
DDR1-245ENST00000484556 ATN1P54259 1190 aaPredicted RBP22.58■■□□□ 1.21
DDR1-245ENST00000484556 MAP3K10Q02779 954 aa22.58■■□□□ 1.21
DDR1-245ENST00000484556 SPP2Q13103 211 aa22.58■■□□□ 1.21
DDR1-245ENST00000484556 PUM3Q15397 648 aaKnown RBP22.58■■□□□ 1.21
DDR1-245ENST00000484556 CCL14Q16627 93 aa22.58■■□□□ 1.21
DDR1-245ENST00000484556 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
DDR1-245ENST00000484556 IDI2Q9BXS1 227 aa22.58■■□□□ 1.21
DDR1-245ENST00000484556 KIF16BQ96L93 1317 aa22.57■■□□□ 1.2
DDR1-245ENST00000484556 LDHBP07195 334 aaKnown RBP22.57■■□□□ 1.2
DDR1-245ENST00000484556 NBPF7P0C2Y1 421 aaPredicted RBP22.57■■□□□ 1.2
DDR1-245ENST00000484556 FGFR2P21802 821 aa22.57■■□□□ 1.2
DDR1-245ENST00000484556 PLA2G5P39877 138 aa22.57■■□□□ 1.2
DDR1-245ENST00000484556 PICALMQ13492 652 aa22.57■■□□□ 1.2
DDR1-245ENST00000484556 NUDT12Q9BQG2 462 aa22.57■■□□□ 1.2
DDR1-245ENST00000484556 DDX4Q9NQI0 724 aaKnown RBP22.57■■□□□ 1.2
DDR1-245ENST00000484556 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
DDR1-245ENST00000484556 PABPC4Q13310 644 aaKnown RBP eCLIP22.56■■□□□ 1.2
DDR1-245ENST00000484556 TJAP1Q5JTD0 557 aa22.56■■□□□ 1.2
DDR1-245ENST00000484556 USP38Q8NB14 1042 aa22.56■■□□□ 1.2
DDR1-245ENST00000484556 MORF4L1Q9UBU8 362 aa22.56■■□□□ 1.2
DDR1-245ENST00000484556 PRKAG2Q9UGJ0 569 aa22.56■■□□□ 1.2
DDR1-245ENST00000484556 TMEM265A0A087WTH1 108 aa22.55■■□□□ 1.2
DDR1-245ENST00000484556 VAMP4O75379 141 aa22.55■■□□□ 1.2
DDR1-245ENST00000484556 ALDH1L1O75891 902 aa22.55■■□□□ 1.2
DDR1-245ENST00000484556 ANKRD44Q8N8A2 993 aa22.55■■□□□ 1.2
DDR1-245ENST00000484556 SOCS4Q8WXH5 440 aa22.55■■□□□ 1.2
DDR1-245ENST00000484556 SRCIN1Q9C0H9 1055 aa22.55■■□□□ 1.2
DDR1-245ENST00000484556 XRCC5P13010 732 aaKnown RBP22.54■■□□□ 1.2
DDR1-245ENST00000484556 WWC1Q8IX03 1113 aa22.54■■□□□ 1.2
DDR1-245ENST00000484556 ZNF280CQ8ND82 737 aa22.54■■□□□ 1.2
DDR1-245ENST00000484556 SLC5A1P13866 664 aa22.53■■□□□ 1.2
DDR1-245ENST00000484556 RTP1P59025 263 aa22.53■■□□□ 1.2
DDR1-245ENST00000484556 DDX10Q13206 875 aaKnown RBP22.53■■□□□ 1.2
DDR1-245ENST00000484556 RABL6Q3YEC7 729 aaPredicted RBP22.53■■□□□ 1.2
DDR1-245ENST00000484556 FAM122AQ96E09 287 aa22.53■■□□□ 1.2
DDR1-245ENST00000484556 PDE3AQ14432 1141 aa22.52■■□□□ 1.2
DDR1-245ENST00000484556 TRMT44Q8IYL2 757 aaKnown RBP22.52■■□□□ 1.2
DDR1-245ENST00000484556 TXNRD2Q9NNW7 524 aa22.52■■□□□ 1.2
DDR1-245ENST00000484556 IRX3P78415 501 aaPredicted RBP22.51■■□□□ 1.19
DDR1-245ENST00000484556 SMAD3P84022 425 aaKnown RBP22.51■■□□□ 1.19
DDR1-245ENST00000484556 EXOSC9Q06265 439 aaKnown RBP22.51■■□□□ 1.19
DDR1-245ENST00000484556 PRDM5Q9NQX1 630 aaPredicted RBP22.51■■□□□ 1.19
DDR1-245ENST00000484556 ATP11BQ9Y2G3 1177 aa22.51■■□□□ 1.19
DDR1-245ENST00000484556 GAKO14976 1311 aa22.51■■□□□ 1.19
DDR1-245ENST00000484556 RGS2P41220 211 aa22.5■■□□□ 1.19
DDR1-245ENST00000484556 LPIN2Q92539 896 aa22.5■■□□□ 1.19
DDR1-245ENST00000484556 USP6NLQ92738 828 aa22.5■■□□□ 1.19
DDR1-245ENST00000484556 PORCNQ9H237 461 aa22.5■■□□□ 1.19
DDR1-245ENST00000484556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.5■■□□□ 1.19
DDR1-245ENST00000484556 RLFQ13129 1914 aa22.49■■□□□ 1.19
DDR1-245ENST00000484556 RRP1BQ14684 758 aaKnown RBP22.49■■□□□ 1.19
DDR1-245ENST00000484556 CCDC27Q2M243 656 aa22.49■■□□□ 1.19
DDR1-245ENST00000484556 GPRC5AQ8NFJ5 357 aa22.49■■□□□ 1.19
DDR1-245ENST00000484556 BADQ92934 168 aa22.49■■□□□ 1.19
DDR1-245ENST00000484556 P2RX7Q99572 595 aaKnown RBP22.49■■□□□ 1.19
DDR1-245ENST00000484556 OSBPL5Q9H0X9 879 aaPredicted RBP22.49■■□□□ 1.19
DDR1-245ENST00000484556 IL16Q14005 1332 aa22.49■■□□□ 1.19
DDR1-245ENST00000484556 BTDP43251 543 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 HERVK_113P62684 666 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 SH3D19Q5HYK7 790 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 GPR142Q7Z601 462 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 APBA2Q99767 749 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 UTYO14607 1347 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 SALL1Q9NSC2 1324 aa22.48■■□□□ 1.19
DDR1-245ENST00000484556 MAPK4P31152 587 aa22.47■■□□□ 1.19
DDR1-245ENST00000484556 MTMR2Q13614 643 aa22.47■■□□□ 1.19
DDR1-245ENST00000484556 MORN1Q5T089 497 aa22.47■■□□□ 1.19
DDR1-245ENST00000484556 TBC1D12O60347 775 aa22.46■■□□□ 1.19
DDR1-245ENST00000484556 Q3C1V9 767 aa22.46■■□□□ 1.19
DDR1-245ENST00000484556 DZIP1Q86YF9 867 aaKnown RBP22.46■■□□□ 1.19
DDR1-245ENST00000484556 CCAR1Q8IX12 1150 aaKnown RBP22.46■■□□□ 1.19
DDR1-245ENST00000484556 PAGR1Q9BTK6 254 aa22.46■■□□□ 1.19
DDR1-245ENST00000484556 DDX20Q9UHI6 824 aaKnown RBP22.46■■□□□ 1.19
DDR1-245ENST00000484556 USP17L5A8MUK1 530 aa22.45■■□□□ 1.18
DDR1-245ENST00000484556 GRIN2CQ14957 1233 aa22.45■■□□□ 1.18
DDR1-245ENST00000484556 PLEKHH3Q7Z736 793 aa22.45■■□□□ 1.18
DDR1-245ENST00000484556 TBC1D2Q9BYX2 928 aa22.45■■□□□ 1.18
DDR1-245ENST00000484556 FLRT1Q9NZU1 646 aa22.45■■□□□ 1.18
DDR1-245ENST00000484556 RBPJLQ9UBG7 517 aa22.45■■□□□ 1.18
DDR1-245ENST00000484556 EYA2O00167 538 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 DNM1LO00429 736 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 CNGA1P29973 690 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 CAP2P40123 477 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 PHKA1P46020 1223 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 ERVK-9P63128 1117 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 ERVK-24P63145 666 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 GNL3LQ9NVN8 582 aaKnown RBP22.44■■□□□ 1.18
DDR1-245ENST00000484556 DENND2AQ9ULE3 1009 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 NDUFB9Q9Y6M9 179 aa22.44■■□□□ 1.18
DDR1-245ENST00000484556 MAP3K12Q12852 859 aa22.43■■□□□ 1.18
DDR1-245ENST00000484556 GJC2Q5T442 439 aaPredicted RBP22.43■■□□□ 1.18
DDR1-245ENST00000484556 LPAR1Q92633 364 aa22.43■■□□□ 1.18
DDR1-245ENST00000484556 PRKRIP1Q9H875 184 aaPredicted RBP22.43■■□□□ 1.18
DDR1-245ENST00000484556 AS3MTQ9HBK9 375 aa22.43■■□□□ 1.18
DDR1-245ENST00000484556 CWC22Q9HCG8 908 aaKnown RBP22.43■■□□□ 1.18
DDR1-245ENST00000484556 HOXA7P31268 230 aaPredicted RBP22.42■■□□□ 1.18
DDR1-245ENST00000484556 HOXD11P31277 338 aaPredicted RBP22.42■■□□□ 1.18
DDR1-245ENST00000484556 ATP2B3Q16720 1220 aa22.42■■□□□ 1.18
DDR1-245ENST00000484556 TRIM60Q495X7 471 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms