RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 CYP2C8P10632 490 aa34.68■■■■□ 3.14
HLA-C-207ENST00000484378 NBPF11Q86T75 865 aa34.68■■■■□ 3.14
HLA-C-207ENST00000484378 DDX19BQ9UMR2 479 aa34.68■■■■□ 3.14
HLA-C-207ENST00000484378 COG6Q9Y2V7 657 aa34.68■■■■□ 3.14
HLA-C-207ENST00000484378 BRCA2P51587 3418 aa34.68■■■■□ 3.14
HLA-C-207ENST00000484378 IDH1O75874 414 aaKnown RBP34.67■■■■□ 3.14
HLA-C-207ENST00000484378 TGFBRAP1Q8WUH2 860 aa34.67■■■■□ 3.14
HLA-C-207ENST00000484378 ZNF333Q96JL9 665 aa34.67■■■■□ 3.14
HLA-C-207ENST00000484378 DHX36Q9H2U1 1008 aaKnown RBP34.67■■■■□ 3.14
HLA-C-207ENST00000484378 HERC5Q9UII4 1024 aaKnown RBP34.67■■■■□ 3.14
HLA-C-207ENST00000484378 PSMC4P43686 418 aa34.66■■■■□ 3.14
HLA-C-207ENST00000484378 MAPKAPK5Q8IW41 473 aa34.66■■■■□ 3.14
HLA-C-207ENST00000484378 PI4KBQ9UBF8 816 aa34.66■■■■□ 3.14
HLA-C-207ENST00000484378 RCAN3Q9UKA8 241 aa34.66■■■■□ 3.14
HLA-C-207ENST00000484378 CDK5RAP2Q96SN8 1893 aa34.66■■■■□ 3.14
HLA-C-207ENST00000484378 ATAD5Q96QE3 1844 aa34.66■■■■□ 3.14
HLA-C-207ENST00000484378 FOCADQ5VW36 1801 aa34.65■■■■□ 3.14
HLA-C-207ENST00000484378 FLT1P17948 1338 aa34.65■■■■□ 3.14
HLA-C-207ENST00000484378 CYP7A1P22680 504 aa34.65■■■■□ 3.14
HLA-C-207ENST00000484378 PRMT2P55345 433 aa34.65■■■■□ 3.14
HLA-C-207ENST00000484378 IL1RAPL2Q9NP60 686 aa34.65■■■■□ 3.14
HLA-C-207ENST00000484378 TRIM47Q96LD4 638 aa34.64■■■■□ 3.14
HLA-C-207ENST00000484378 SLC45A1Q9Y2W3 748 aa34.64■■■■□ 3.14
HLA-C-207ENST00000484378 NDUFB9Q9Y6M9 179 aa34.64■■■■□ 3.14
HLA-C-207ENST00000484378 KIAA0100Q14667 2235 aaKnown RBP34.64■■■■□ 3.14
HLA-C-207ENST00000484378 SIPA1L1O43166 1804 aa34.63■■■■□ 3.13
HLA-C-207ENST00000484378 HMMRO75330 724 aa34.63■■■■□ 3.13
HLA-C-207ENST00000484378 FMNL1O95466 1100 aaPredicted RBP34.63■■■■□ 3.13
HLA-C-207ENST00000484378 CTGFP29279 349 aa34.63■■■■□ 3.13
HLA-C-207ENST00000484378 CAP2P40123 477 aa34.63■■■■□ 3.13
HLA-C-207ENST00000484378 RPAP2Q8IXW5 612 aaPredicted RBP34.63■■■■□ 3.13
HLA-C-207ENST00000484378 RHPN1Q8TCX5 695 aa34.63■■■■□ 3.13
HLA-C-207ENST00000484378 TMEM106CQ9BVX2 250 aa34.63■■■■□ 3.13
HLA-C-207ENST00000484378 MKI67P46013 3256 aaKnown RBP34.62■■■■□ 3.13
HLA-C-207ENST00000484378 BCRP11274 1271 aa34.62■■■■□ 3.13
HLA-C-207ENST00000484378 ZBTB40Q9NUA8 1239 aa34.62■■■■□ 3.13
HLA-C-207ENST00000484378 APBB1O00213 710 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 HOXD10P28358 340 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 DYNLL1P63167 89 aaKnown RBP34.61■■■■□ 3.13
HLA-C-207ENST00000484378 SH3TC2Q8TF17 1288 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 TRIM34Q9BYJ4 488 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 TBC1D2Q9BYX2 928 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 SRRDQ9UH36 339 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 AGTPBP1Q9UPW5 1226 aa34.61■■■■□ 3.13
HLA-C-207ENST00000484378 SPP2Q13103 211 aa34.6■■■■□ 3.13
HLA-C-207ENST00000484378 RRP1BQ14684 758 aaKnown RBP34.6■■■■□ 3.13
HLA-C-207ENST00000484378 CRACR2BQ8N4Y2 399 aaPredicted RBP34.6■■■■□ 3.13
HLA-C-207ENST00000484378 MAGEB6Q8N7X4 407 aa34.6■■■■□ 3.13
HLA-C-207ENST00000484378 ZNF280CQ8ND82 737 aa34.6■■■■□ 3.13
HLA-C-207ENST00000484378 SMCR8Q8TEV9 937 aaPredicted RBP34.6■■■■□ 3.13
HLA-C-207ENST00000484378 OSBPP22059 807 aa34.59■■■■□ 3.13
HLA-C-207ENST00000484378 MAP3K12Q12852 859 aa34.59■■■■□ 3.13
HLA-C-207ENST00000484378 CLASRPQ8N2M8 674 aaKnown RBP34.59■■■■□ 3.13
HLA-C-207ENST00000484378 MIGA1Q8NAN2 632 aa34.59■■■■□ 3.13
HLA-C-207ENST00000484378 KIF1BPQ96EK5 621 aa34.59■■■■□ 3.13
HLA-C-207ENST00000484378 CHMP4BQ9H444 224 aaKnown RBP34.59■■■■□ 3.13
HLA-C-207ENST00000484378 ANTXR1Q9H6X2 564 aa34.59■■■■□ 3.13
HLA-C-207ENST00000484378 SAP30BPQ9UHR5 308 aaKnown RBP34.59■■■■□ 3.13
HLA-C-207ENST00000484378 PALD1Q9ULE6 856 aa34.59■■■■□ 3.13
HLA-C-207ENST00000484378 USP17L5A8MUK1 530 aa34.58■■■■□ 3.13
HLA-C-207ENST00000484378 MYCP01106 439 aaPredicted RBP34.58■■■■□ 3.13
HLA-C-207ENST00000484378 FCGRTP55899 365 aa34.58■■■■□ 3.13
HLA-C-207ENST00000484378 PRPF38BQ5VTL8 546 aaKnown RBP34.58■■■■□ 3.13
HLA-C-207ENST00000484378 CERS3Q8IU89 383 aa34.58■■■■□ 3.13
HLA-C-207ENST00000484378 LOC285556D6RIA3 1793 aa34.58■■■■□ 3.13
HLA-C-207ENST00000484378 MYPNQ86TC9 1320 aa34.57■■■■□ 3.13
HLA-C-207ENST00000484378 EN2P19622 333 aaPredicted RBP34.57■■■■□ 3.12
HLA-C-207ENST00000484378 SLC4A8Q2Y0W8 1093 aa34.57■■■■□ 3.12
HLA-C-207ENST00000484378 SIRT2Q8IXJ6 389 aa34.57■■■■□ 3.12
HLA-C-207ENST00000484378 PROCA1Q8NCQ7 364 aaPredicted RBP34.57■■■■□ 3.12
HLA-C-207ENST00000484378 RAET1EQ8TD07 263 aa34.57■■■■□ 3.12
HLA-C-207ENST00000484378 HLA-DOAP06340 250 aa34.56■■■■□ 3.12
HLA-C-207ENST00000484378 TREML2Q5T2D2 321 aa34.56■■■■□ 3.12
HLA-C-207ENST00000484378 DNAJC18Q9H819 358 aa34.56■■■■□ 3.12
HLA-C-207ENST00000484378 AS3MTQ9HBK9 375 aa34.56■■■■□ 3.12
HLA-C-207ENST00000484378 PNMA3Q9UL41 463 aa34.56■■■■□ 3.12
HLA-C-207ENST00000484378 MGAMO43451 1857 aa34.55■■■■□ 3.12
HLA-C-207ENST00000484378 HMGCS2P54868 508 aa34.55■■■■□ 3.12
HLA-C-207ENST00000484378 TMED8Q6PL24 325 aaPredicted RBP34.55■■■■□ 3.12
HLA-C-207ENST00000484378 FOXP4Q8IVH2 680 aaPredicted RBP34.55■■■■□ 3.12
HLA-C-207ENST00000484378 BCL11AQ9H165 835 aa34.55■■■■□ 3.12
HLA-C-207ENST00000484378 ASNSP08243 561 aa34.54■■■■□ 3.12
HLA-C-207ENST00000484378 IFIT2P09913 472 aaKnown RBP34.54■■■■□ 3.12
HLA-C-207ENST00000484378 USP5P45974 858 aa34.54■■■■□ 3.12
HLA-C-207ENST00000484378 METTL16Q86W50 562 aaKnown RBP34.54■■■■□ 3.12
HLA-C-207ENST00000484378 TTF1Q15361 905 aaPredicted RBP34.53■■■■□ 3.12
HLA-C-207ENST00000484378 PRKCZQ05513 592 aa34.52■■■■□ 3.12
HLA-C-207ENST00000484378 MYH1P12882 1939 aa34.51■■■■□ 3.12
HLA-C-207ENST00000484378 RAB11FIP3O75154 756 aa34.51■■■■□ 3.12
HLA-C-207ENST00000484378 GRK4P32298 578 aa34.51■■■■□ 3.12
HLA-C-207ENST00000484378 PABPC4Q13310 644 aaKnown RBP eCLIP34.51■■■■□ 3.12
HLA-C-207ENST00000484378 GDF11O95390 407 aa34.5■■■■□ 3.11
HLA-C-207ENST00000484378 ANKRD13CQ8N6S4 541 aa34.5■■■■□ 3.11
HLA-C-207ENST00000484378 WDR18Q9BV38 432 aa34.5■■■■□ 3.11
HLA-C-207ENST00000484378 MTMR2Q13614 643 aa34.49■■■■□ 3.11
HLA-C-207ENST00000484378 SH3D19Q5HYK7 790 aa34.49■■■■□ 3.11
HLA-C-207ENST00000484378 DNAJC2Q99543 621 aaKnown RBP34.49■■■■□ 3.11
HLA-C-207ENST00000484378 JAG1P78504 1218 aa34.48■■■■□ 3.11
HLA-C-207ENST00000484378 PDE3AQ14432 1141 aa34.48■■■■□ 3.11
HLA-C-207ENST00000484378 C20orf194Q5TEA3 1177 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms