RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 GPN3Q9UHW5 284 aaPredicted RBP6.82□□□□□ -1.32
SSBP1-211ENST00000484178 ERICH3Q5RHP9 1530 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 NME2P22392 152 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 FCGRTP55899 365 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 KCNB2Q92953 911 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 EMILIN2Q9BXX0 1053 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 NLRP2Q9NX02 1062 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 SOGA1O94964 1423 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 CLIP1P30622 1438 aa6.81□□□□□ -1.32
SSBP1-211ENST00000484178 IGSF3O75054 1194 aa6.8□□□□□ -1.32
SSBP1-211ENST00000484178 SCARA3Q6AZY7 606 aa6.8□□□□□ -1.32
SSBP1-211ENST00000484178 TMC1Q8TDI8 760 aa6.8□□□□□ -1.32
SSBP1-211ENST00000484178 STK35Q8TDR2 534 aa6.8□□□□□ -1.32
SSBP1-211ENST00000484178 HEXIM2Q96MH2 286 aaKnown RBP6.8□□□□□ -1.32
SSBP1-211ENST00000484178 BCO2Q9BYV7 579 aa6.8□□□□□ -1.32
SSBP1-211ENST00000484178 ABCC8Q09428 1581 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 NTF4P34130 210 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 CD96P40200 585 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 RING1Q06587 406 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 ARHGAP27Q6ZUM4 889 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.79□□□□□ -1.32
SSBP1-211ENST00000484178 ASB11Q8WXH4 323 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 KRTAP4-9Q9BYQ8 210 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 GTF2IRD1Q9UHL9 959 aa6.79□□□□□ -1.32
SSBP1-211ENST00000484178 E9PSI1 815 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 MESP2Q0VG99 397 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 KRTAP19-4Q3LI73 84 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 TOP6BLQ8N6T0 577 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 GPBAR1Q8TDU6 330 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 ANKRD24Q8TF21 1146 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 FAM53CQ9NYF3 392 aa6.78□□□□□ -1.32
SSBP1-211ENST00000484178 DSC3Q14574 896 aa6.77□□□□□ -1.33
SSBP1-211ENST00000484178 FBLN7Q53RD9 439 aa6.77□□□□□ -1.33
SSBP1-211ENST00000484178 MAP1SQ66K74 1059 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-211ENST00000484178 SPACA3Q8IXA5 215 aa6.77□□□□□ -1.33
SSBP1-211ENST00000484178 C3orf58Q8NDZ4 430 aa6.77□□□□□ -1.33
SSBP1-211ENST00000484178 NECAB3Q96P71 396 aaPredicted RBP6.77□□□□□ -1.33
SSBP1-211ENST00000484178 SSU72Q9NP77 194 aaKnown RBP6.77□□□□□ -1.33
SSBP1-211ENST00000484178 FANCGO15287 622 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 TRIM37O94972 964 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 ZNF124Q15973 351 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 PKN1Q16512 942 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 PI16Q6UXB8 463 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 SPOCD1Q6ZMY3 1216 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 KSR1Q8IVT5 923 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 FAM84AQ96KN4 292 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 SRCIN1Q9C0H9 1055 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 PRDM10Q9NQV6 1147 aa6.76□□□□□ -1.33
SSBP1-211ENST00000484178 ATAD2BQ9ULI0 1458 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 SOWAHDA6NJG2 315 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 BMP6P22004 513 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 CLCN7P51798 805 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 ENOX2Q16206 610 aaKnown RBP6.75□□□□□ -1.33
SSBP1-211ENST00000484178 NKPD1Q17RQ9 610 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 ZSWIM9Q86XI8 627 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 KCT2Q8NC54 265 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 SLC38A3Q99624 504 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 LMCD1Q9NZU5 365 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 AKAP2Q9Y2D5 859 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 TOP2BQ02880 1626 aa6.75□□□□□ -1.33
SSBP1-211ENST00000484178 CUX2O14529 1486 aa6.74□□□□□ -1.33
SSBP1-211ENST00000484178 CCDC27Q2M243 656 aa6.74□□□□□ -1.33
SSBP1-211ENST00000484178 CEP44Q9C0F1 390 aa6.74□□□□□ -1.33
SSBP1-211ENST00000484178 DCTN4Q9UJW0 460 aa6.74□□□□□ -1.33
SSBP1-211ENST00000484178 SAMM50Q9Y512 469 aa6.74□□□□□ -1.33
SSBP1-211ENST00000484178 MAP3K1Q13233 1512 aa6.74□□□□□ -1.33
SSBP1-211ENST00000484178 ZNF503-AS2A6NEH8 195 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 ENC1O14682 589 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 TREHO43280 583 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 ITIH2P19823 946 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
SSBP1-211ENST00000484178 PPM1JQ5JR12 505 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 ZBTB37Q5TC79 503 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 C22orf34Q6ZV56 151 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 SND1Q7KZF4 910 aaKnown RBP eCLIP6.73□□□□□ -1.331e-16■■□□□ 13.8
SSBP1-211ENST00000484178 CILP2Q8IUL8 1156 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 FBF1Q8TES7 1133 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 ACSBG1Q96GR2 724 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.73□□□□□ -1.33
SSBP1-211ENST00000484178 MAPK8IP1Q9UQF2 711 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 GNEQ9Y223 722 aaKnown RBP6.73□□□□□ -1.33
SSBP1-211ENST00000484178 PITPNM2Q9BZ72 1349 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 PRXQ9BXM0 1461 aa6.73□□□□□ -1.33
SSBP1-211ENST00000484178 EOMESO95936 686 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 GSTT1P30711 240 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 ZP2Q05996 745 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 CTNND2Q9UQB3 1225 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 IVNS1ABPQ9Y6Y0 642 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 RRBP1Q9P2E9 1410 aaKnown RBP6.72□□□□□ -1.33
SSBP1-211ENST00000484178 BICRAQ9NZM4 1560 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 TTBK1Q5TCY1 1321 aaPredicted RBP6.72□□□□□ -1.33
SSBP1-211ENST00000484178 BIVM-ERCC5R4GMW8 1640 aa6.72□□□□□ -1.33
SSBP1-211ENST00000484178 HMGXB3Q12766 1538 aa6.71□□□□□ -1.33
SSBP1-211ENST00000484178 UNC13AQ9UPW8 1703 aa6.71□□□□□ -1.34
SSBP1-211ENST00000484178 SYNJ1O43426 1573 aa6.71□□□□□ -1.34
SSBP1-211ENST00000484178 PNMA6FA0A0J9YX94 578 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms