RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 IL15P40933 162 aaPredicted RBP13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 RABEP2Q9H5N1 569 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 VEZTQ9HBM0 779 aa13.16□□□□□ -0.3
SEC61A1-205ENST00000483956 H7C1W4 665 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 MYO1FO00160 1098 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 ZNF202O95125 648 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 RAPGEF4Q8WZA2 1011 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 C4AP0C0L4 1744 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 C4BP0C0L5 1744 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 KLHL33A6NCF5 533 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 EBAG9O00559 213 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 VSNL1P62760 191 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 SRGAP1Q7Z6B7 1085 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 CABS1Q96KC9 395 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 TACO1Q9BSH4 297 aaKnown RBP13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 CAPN7Q9Y6W3 813 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 WDR19Q8NEZ3 1342 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 MYO1BO43795 1136 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 CUTAO60888 179 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 LMOD1P29536 600 aaPredicted RBP13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 NEUROD6Q96NK8 337 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 HSD3B7Q9H2F3 369 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 TUBE1Q9UJT0 475 aa13.15□□□□□ -0.3
SEC61A1-205ENST00000483956 ATP5J2-PTCD1G3V325 749 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 M0R2C6 588 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 PTCD1O75127 700 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 ATP1A3P13637 1013 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 PFKFB1P16118 471 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 FANCCQ00597 558 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 ANO1Q5XXA6 986 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 CHST3Q7LGC8 479 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 TTC5Q8N0Z6 440 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 MSANTD4Q8NCY6 345 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 PKD1L3Q7Z443 1732 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 CIAO1O76071 339 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 GCFC2P16383 781 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 NF2P35240 595 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 KARSQ15046 597 aaKnown RBP13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 POTEDQ86YR6 584 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 IRX2Q9BZI1 471 aaPredicted RBP13.14□□□□□ -0.31
SEC61A1-205ENST00000483956 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 MEGF6O75095 1541 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 CBFA2T2O43439 604 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 SYF2O95926 243 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 KIF23Q02241 960 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 SYNE3Q6ZMZ3 975 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 DPF2Q92785 391 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 EHD4Q9H223 541 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 ACBD3Q9H3P7 528 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 FAM237AA0A1B0GTK4 181 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 BIN1O00499 593 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 FOXP2O15409 715 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 PPFIA3O75145 1194 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 PRPF6O94906 941 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 RDXP35241 583 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 IMMTQ16891 758 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 TMEM139Q8IV31 216 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 MROH7-TTC4A0A0A0MT08 1334 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 ALS2Q96Q42 1657 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 EYA2O00167 538 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 TFRCP02786 760 aaKnown RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 TIMM10P62072 90 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 DDR1Q08345 913 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 SLC39A14Q15043 492 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 OTUD7BQ6GQQ9 843 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 IGSF22Q8N9C0 903 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 OSBP2Q969R2 916 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 HPSEQ9Y251 543 aa13.13□□□□□ -0.31
SEC61A1-205ENST00000483956 KLF18A0A0U1RQI7 1052 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 KIF28PB7ZC32 967 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 POTEB2H3BUK9 544 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 TBC1D8BQ0IIM8 1120 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 RIN2Q8WYP3 895 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 ODF2LQ9ULJ1 636 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 PRC1O43663 620 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 SMARCC1Q92922 1105 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 KAT14Q9H8E8 782 aa13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 CCDC9Q9Y3X0 531 aaKnown RBP13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 ZNF142P52746 1687 aaPredicted RBP13.12□□□□□ -0.31
SEC61A1-205ENST00000483956 PPP6R2O75170 966 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms