RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 ANAPC4Q9UJX5 808 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 ATRNL1Q5VV63 1379 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 ROBO3Q96MS0 1386 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 USP17L12C9JPN9 530 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 USP17L21D6R901 530 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 GALR2O43603 387 aaPredicted RBP10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 PPARAQ07869 468 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 NFIAQ12857 509 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 TSGA10IPQ3SY00 556 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 CTR9Q6PD62 1173 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 SRCAPQ6ZRS2 3230 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 ZC3H15Q8WU90 426 aaKnown RBP10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 FAM151AQ8WW52 585 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 KCNB2Q92953 911 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 IL17RAQ96F46 866 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 TAF1DQ9H5J8 278 aaPredicted RBP10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 ZNF287Q9HBT7 754 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 DDX4Q9NQI0 724 aaKnown RBP10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 GGA3Q9NZ52 723 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 PPP2R3BQ9Y5P8 575 aa10.71□□□□□ -0.69
SHROOM4-204ENST00000483955 MYH1P12882 1939 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 MINDY4BA8MYZ0 360 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 TCP10L2B9ZVM9 353 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 CYP21A2P08686 494 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 VEGFAP15692 232 aaPredicted RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 PSMA5P28066 241 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 CACNB3P54284 484 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 PDE4BQ07343 736 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 TCP10Q12799 353 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 TRDNQ13061 729 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 AKNAD1Q5T1N1 836 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 C12orf60Q5U649 245 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 ANGEL2Q5VTE6 544 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 RALYLQ86SE5 291 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 ZSCAN29Q8IWY8 852 aaPredicted RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 STAG1Q8WVM7 1258 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 DCPSQ96C86 337 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 HOOK2Q96ED9 719 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 EHD4Q9H223 541 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 CNNM2Q9H8M5 875 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 SWAP70Q9UH65 585 aa10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 SAP30BPQ9UHR5 308 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
SHROOM4-204ENST00000483955 CNTNAP1P78357 1384 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 HMGB1P09429 215 aaKnown RBP10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 HAND2P61296 217 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 MFSD6Q6ZSS7 791 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 NCOA7Q8NI08 942 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 TRIM34Q9BYJ4 488 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 PI4KBQ9UBF8 816 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 SERPINB13Q9UIV8 391 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 PALD1Q9ULE6 856 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 SNX14Q9Y5W7 946 aa10.69□□□□□ -0.7
SHROOM4-204ENST00000483955 POTECB2RU33 542 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 E7EWF7 191 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 HIRAP54198 1017 aaPredicted RBP10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 RASA3Q14644 834 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 RABEP1Q15276 862 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 EAPPQ56P03 285 aaPredicted RBP10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 C16orf86Q6ZW13 317 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 TBC1D10CQ8IV04 446 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 SULF1Q8IWU6 871 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 CRACR2BQ8N4Y2 399 aaPredicted RBP10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 NEK1Q96PY6 1258 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 CSRNP1Q96S65 589 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 TM6SF1Q9BZW5 370 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 KRT23Q9C075 422 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 PGAP2Q9UHJ9 254 aa10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 HERC5Q9UII4 1024 aaKnown RBP10.68□□□□□ -0.7
SHROOM4-204ENST00000483955 CYP2D7A0A087X1C5 515 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 DDTLA6NHG4 134 aaPredicted RBP10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 ORC4O43929 436 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 FGRP09769 529 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 CYP2D6P10635 497 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 PLCD1P51178 756 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 CTDSPL2Q05D32 466 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 METTL16Q86W50 562 aaKnown RBP10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 LDHDQ86WU2 507 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 FOXP4Q8IVH2 680 aaPredicted RBP10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 ESR2Q92731 530 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 JAKMIP1Q96N16 626 aaKnown RBP10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 TMEM39BQ9GZU3 492 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 DEFB129Q9H1M3 183 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 MKNK2Q9HBH9 465 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 TOMM22Q9NS69 142 aa10.67□□□□□ -0.7
SHROOM4-204ENST00000483955 ASTN2O75129 1339 aaPredicted RBP10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 NEDD4P46934 1319 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 WDR19Q8NEZ3 1342 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 UTRNP46939 3433 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 TBC1D12O60347 775 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 CASTP20810 708 aaKnown RBP10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 GABPAQ06546 454 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 SLC4A8Q2Y0W8 1093 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 DCAF15Q66K64 600 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 BLOC1S2Q6QNY1 142 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 SH3BP5LQ7L8J4 393 aa10.66□□□□□ -0.7
SHROOM4-204ENST00000483955 ZFPM1Q8IX07 1006 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms