RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 HLA-DOAP06340 250 aa16.81■□□□□ 0.28
SRSF6-202ENST00000483871 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
SRSF6-202ENST00000483871 AMOTL1Q8IY63 956 aa16.81■□□□□ 0.28
SRSF6-202ENST00000483871 SLC44A5Q8NCS7 719 aa16.81■□□□□ 0.28
SRSF6-202ENST00000483871 PPP2R3BQ9Y5P8 575 aa16.81■□□□□ 0.28
SRSF6-202ENST00000483871 ITGBL1O95965 494 aaPredicted RBP16.8■□□□□ 0.28
SRSF6-202ENST00000483871 PRKG1Q13976 671 aa16.8■□□□□ 0.28
SRSF6-202ENST00000483871 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
SRSF6-202ENST00000483871 CDCA5Q96FF9 252 aa16.8■□□□□ 0.28
SRSF6-202ENST00000483871 DNAJC18Q9H819 358 aa16.8■□□□□ 0.28
SRSF6-202ENST00000483871 SIPA1L1O43166 1804 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 HSPA4P34932 840 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 GABPAQ06546 454 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 TBC1D10CQ8IV04 446 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
SRSF6-202ENST00000483871 NKX2-3Q8TAU0 364 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 SERPINB13Q9UIV8 391 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 ANAPC4Q9UJX5 808 aa16.79■□□□□ 0.28
SRSF6-202ENST00000483871 COL2A1P02458 1487 aaPredicted RBP16.79■□□□□ 0.28
SRSF6-202ENST00000483871 PRDM1O75626 825 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 CRACR2BQ8N4Y2 399 aaPredicted RBP16.78■□□□□ 0.28
SRSF6-202ENST00000483871 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.78■□□□□ 0.285e-8■■■□□ 18.2
SRSF6-202ENST00000483871 EPB41L2O43491 1005 aaKnown RBP16.78■□□□□ 0.28
SRSF6-202ENST00000483871 TOMM70O94826 608 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 CDK8P49336 464 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 SUPT20HL1Q3ZLR7 823 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 STOX1Q6ZVD7 989 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 C16orf86Q6ZW13 317 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 METTL16Q86W50 562 aaKnown RBP16.78■□□□□ 0.28
SRSF6-202ENST00000483871 ZNF408Q9H9D4 720 aa16.78■□□□□ 0.28
SRSF6-202ENST00000483871 SSC5DA1L4H1 1573 aa16.77■□□□□ 0.28
SRSF6-202ENST00000483871 EIF5BO60841 1220 aaKnown RBP16.77■□□□□ 0.28
SRSF6-202ENST00000483871 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
SRSF6-202ENST00000483871 COL9A3Q14050 684 aaPredicted RBP16.77■□□□□ 0.28
SRSF6-202ENST00000483871 RRP1BQ14684 758 aaKnown RBP16.77■□□□□ 0.28
SRSF6-202ENST00000483871 EHD4Q9H223 541 aa16.77■□□□□ 0.28
SRSF6-202ENST00000483871 E7EWF7 191 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 TBC1D12O60347 775 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 SHMT1P34896 483 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 AKNAD1Q5T1N1 836 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 MOB2Q70IA6 237 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 LAMB1P07942 1786 aa16.76■□□□□ 0.27
SRSF6-202ENST00000483871 USP2O75604 605 aaPredicted RBP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 RRP12Q5JTH9 1297 aaKnown RBP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 MFSD6Q6ZSS7 791 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 SMC1BQ8NDV3 1235 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 STAG1Q8WVM7 1258 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 KCNB2Q92953 911 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 MKNK2Q9HBH9 465 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 TOMM22Q9NS69 142 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 HERC5Q9UII4 1024 aaKnown RBP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 NEDD4P46934 1319 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 ROBO3Q96MS0 1386 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 FGRP09769 529 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 PDE4BQ07343 736 aa16.75■□□□□ 0.27
SRSF6-202ENST00000483871 RBM46Q8TBY0 533 aaKnown RBP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.75■□□□□ 0.27
SRSF6-202ENST00000483871 PHF20L1A8MW92 1017 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 CELF2O95319 508 aaKnown RBP16.74■□□□□ 0.27
SRSF6-202ENST00000483871 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
SRSF6-202ENST00000483871 MCCP23508 829 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 JAG1P78504 1218 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 FAM47AQ5JRC9 791 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 CST9Q5W186 159 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 TATDN1Q6P1N9 297 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
SRSF6-202ENST00000483871 SWAP70Q9UH65 585 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 LAMA4Q16363 1823 aa16.74■□□□□ 0.27
SRSF6-202ENST00000483871 B4E1Z4 1266 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 PPP1R12BO60237 982 aaPredicted RBP16.73■□□□□ 0.27
SRSF6-202ENST00000483871 GDF11O95390 407 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 RASA1P20936 1047 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 INPP5BP32019 993 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 NF2P35240 595 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
SRSF6-202ENST00000483871 DCAF15Q66K64 600 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 KLRG1Q96E93 195 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 ZNF341Q9BYN7 854 aa16.73■□□□□ 0.27
SRSF6-202ENST00000483871 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.73■□□□□ 0.27
SRSF6-202ENST00000483871 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
SRSF6-202ENST00000483871 RANBP6O60518 1105 aaKnown RBP16.72■□□□□ 0.27
SRSF6-202ENST00000483871 TTLL12Q14166 644 aaPredicted RBP16.72■□□□□ 0.27
SRSF6-202ENST00000483871 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
SRSF6-202ENST00000483871 ZKSCAN4Q969J2 545 aaPredicted RBP16.72■□□□□ 0.27
SRSF6-202ENST00000483871 HOOK2Q96ED9 719 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 WRNIP1Q96S55 665 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 RNF41Q9H4P4 317 aaPredicted RBP16.72■□□□□ 0.27
SRSF6-202ENST00000483871 ORC4O43929 436 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 KDM4AO75164 1064 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 CPA1P15085 419 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 AKR1B1P15121 316 aa16.72■□□□□ 0.27
SRSF6-202ENST00000483871 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms