RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ZMYM1Q5SVZ6 1142 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 ERO1BQ86YB8 467 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 CCDC136Q96JN2 1154 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 TRIM34Q9BYJ4 488 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 ELP3Q9H9T3 547 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 DCP1AQ9NPI6 582 aaPredicted RBP18.76■□□□□ 0.59
RPP40-206ENST00000483546 PALD1Q9ULE6 856 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 SNCAIPQ9Y6H5 919 aa18.76■□□□□ 0.59
RPP40-206ENST00000483546 ATAD5Q96QE3 1844 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 BAZ2AQ9UIF9 1905 aaKnown RBP18.75■□□□□ 0.59
RPP40-206ENST00000483546 MANSC4A6NHS7 340 aaPredicted RBP18.75■□□□□ 0.59
RPP40-206ENST00000483546 CA12O43570 354 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 PDE4AP27815 886 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 INHBEP58166 350 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 SLFNL1Q499Z3 407 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 GIMAP6Q6P9H5 292 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 AMOTL1Q8IY63 956 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 CRACR2BQ8N4Y2 399 aaPredicted RBP18.75■□□□□ 0.59
RPP40-206ENST00000483546 OSBP2Q969R2 916 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 STRBPQ96SI9 672 aaKnown RBP18.75■□□□□ 0.59
RPP40-206ENST00000483546 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
RPP40-206ENST00000483546 GPAA1O43292 621 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 CHGBP05060 677 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 INPP5BP32019 993 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 PPATQ06203 517 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 SCYL3Q8IZE3 742 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 SDR42E1Q8WUS8 393 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 ZKSCAN4Q969J2 545 aaPredicted RBP18.74■□□□□ 0.59
RPP40-206ENST00000483546 OPTNQ96CV9 577 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 HELLSQ9NRZ9 838 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 GINM1Q9NU53 330 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 MCM9Q9NXL9 1143 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 SAP30BPQ9UHR5 308 aaKnown RBP18.74■□□□□ 0.59
RPP40-206ENST00000483546 SERPINB13Q9UIV8 391 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 SLC4A4Q9Y6R1 1079 aa18.74■□□□□ 0.59
RPP40-206ENST00000483546 HIP1O00291 1037 aa18.73■□□□□ 0.59
RPP40-206ENST00000483546 POLR3DP05423 398 aaPredicted RBP18.73■□□□□ 0.59
RPP40-206ENST00000483546 PPIL2Q13356 520 aa18.73■□□□□ 0.59
RPP40-206ENST00000483546 TTC22Q5TAA0 569 aa18.73■□□□□ 0.59
RPP40-206ENST00000483546 RILPL2Q969X0 211 aa18.73■□□□□ 0.59
RPP40-206ENST00000483546 TBC1D2Q9BYX2 928 aa18.73■□□□□ 0.59
RPP40-206ENST00000483546 PICK1Q9NRD5 415 aa18.73■□□□□ 0.59
RPP40-206ENST00000483546 MYH8P13535 1937 aa18.72■□□□□ 0.59
RPP40-206ENST00000483546 TM4SF4P48230 202 aa18.72■□□□□ 0.59
RPP40-206ENST00000483546 ARPP21Q9UBL0 812 aaPredicted RBP18.72■□□□□ 0.59
RPP40-206ENST00000483546 M0R2C6 588 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 PRKAB2O43741 272 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 HSPA1AP0DMV8 641 aaKnown RBP18.71■□□□□ 0.59
RPP40-206ENST00000483546 HSPA1BP0DMV9 641 aaKnown RBP18.71■□□□□ 0.59
RPP40-206ENST00000483546 CAP2P40123 477 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 GTF2A2P52657 109 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 OTUD5Q96G74 571 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 ZIC5Q96T25 663 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 SAGE1Q9NXZ1 904 aa18.71■□□□□ 0.59
RPP40-206ENST00000483546 PHIPQ8WWQ0 1821 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 TESPA1A2RU30 521 aaPredicted RBP18.7■□□□□ 0.58
RPP40-206ENST00000483546 ASNSP08243 561 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 GJA5P36382 358 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 SBK1Q52WX2 424 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 TATDN1Q6P1N9 297 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 NACAP1Q9BZK3 213 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 DNAJC18Q9H819 358 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 SWAP70Q9UH65 585 aa18.7■□□□□ 0.58
RPP40-206ENST00000483546 FAM196BA6NMK8 535 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 GSG1L2A8MUP6 293 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 PATL2C9JE40 543 aaKnown RBP18.69■□□□□ 0.58
RPP40-206ENST00000483546 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 PTPRAP18433 802 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 SDSP20132 328 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 PLCD1P51178 756 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
RPP40-206ENST00000483546 GABPAQ06546 454 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 MKRN3Q13064 507 aaKnown RBP18.69■□□□□ 0.58
RPP40-206ENST00000483546 SNAPC2Q13487 334 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 MCMDC2Q4G0Z9 681 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 C12orf60Q5U649 245 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 OTUD7BQ6GQQ9 843 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.69■□□□□ 0.58
RPP40-206ENST00000483546 KCNH4Q9UQ05 1017 aa18.69■□□□□ 0.58
RPP40-206ENST00000483546 USP17L12C9JPN9 530 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 USP17L21D6R901 530 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 CXCL11O14625 94 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 CETPP11597 493 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 MS4A4AQ96JQ5 239 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 SEC62Q99442 399 aaKnown RBP18.68■□□□□ 0.58
RPP40-206ENST00000483546 DIAPH3Q9NSV4 1193 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 PPP4R2Q9NY27 417 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 PTPRFP10586 1907 aa18.68■□□□□ 0.58
RPP40-206ENST00000483546 PCNTO95613 3336 aa18.67■□□□□ 0.58
RPP40-206ENST00000483546 IRF6O14896 467 aa18.67■□□□□ 0.58
RPP40-206ENST00000483546 GSPT1P15170 499 aaKnown RBP18.67■□□□□ 0.58
RPP40-206ENST00000483546 CTCFP49711 727 aaPredicted RBP18.67■□□□□ 0.58
RPP40-206ENST00000483546 CTR9Q6PD62 1173 aa18.67■□□□□ 0.58
RPP40-206ENST00000483546 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
RPP40-206ENST00000483546 AS3MTQ9HBK9 375 aa18.67■□□□□ 0.58
RPP40-206ENST00000483546 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
RPP40-206ENST00000483546 A0A0D9SFI3 127 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 USP17L5A8MUK1 530 aa18.66■□□□□ 0.58
RPP40-206ENST00000483546 APPP05067 770 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms