RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 PLD6Q8N2A8 252 aaKnown RBP6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 TOP6BLQ8N6T0 577 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 ZNF507Q8TCN5 953 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 PRDM10Q9NQV6 1147 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 GTF2IRD1Q9UHL9 959 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 TTF2Q9UNY4 1162 aaKnown RBP6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 SNX11Q9Y5W9 270 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 CSADQ9Y600 493 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 SNCAIPQ9Y6H5 919 aa6.77□□□□□ -1.33
NSMCE4A-210ENST00000483541 TMEM265A0A087WTH1 108 aa6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 JUNBP17275 347 aaPredicted RBP6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 ARHGAP27Q6ZUM4 889 aa6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 CYFIP1Q7L576 1253 aa6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 HDXQ7Z353 690 aa6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 SPRED2Q7Z698 418 aa6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 ELMO3Q96BJ8 720 aa6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 DUSP9Q99956 384 aaKnown RBP6.76□□□□□ -1.33
NSMCE4A-210ENST00000483541 CEACAM5P06731 702 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 ITGB5P18084 799 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 INPP5AQ14642 412 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 CCDC85BQ15834 202 aaPredicted RBP6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 TTBK2Q6IQ55 1244 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 WFDC3Q8IUB2 231 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 AEBP1Q8IUX7 1158 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 HEXIM2Q96MH2 286 aaKnown RBP6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 TNKS2Q9H2K2 1166 aa6.75□□□□□ -1.33
NSMCE4A-210ENST00000483541 LRIG2O94898 1065 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 FUT4P22083 530 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 CAP2P40123 477 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 PTPN11Q06124 597 aaPredicted RBP6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 BNIP3Q12983 259 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 HRASLS5Q96KN8 279 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 WNT10AQ9GZT5 417 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 PLAGL2Q9UPG8 496 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 TACC3Q9Y6A5 838 aa6.74□□□□□ -1.33
NSMCE4A-210ENST00000483541 RLBP1P12271 317 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 PLCL1Q15111 1095 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 AOC3Q16853 763 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 ZNF574Q6ZN55 896 aaPredicted RBP6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 AGMOQ6ZNB7 445 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 GAL3ST3Q96A11 431 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 PLPPR2Q96GM1 343 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 U3KQE9 123 aa6.73□□□□□ -1.33
NSMCE4A-210ENST00000483541 CD8BP10966 210 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 LMNB1P20700 586 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 DAB2P98082 770 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 ZNF792Q3KQV3 632 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 DNAJC14Q6Y2X3 702 aaPredicted RBP6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 ARMCX6Q7L4S7 300 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 UBE3DQ7Z6J8 389 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 NPAS4Q8IUM7 802 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 PARP2Q9UGN5 583 aa6.72□□□□□ -1.33
NSMCE4A-210ENST00000483541 BIN1O00499 593 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 EOMESO95936 686 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 ERCC3P19447 782 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 ST13P50502 369 aaKnown RBP6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 SLBPQ14493 270 aaKnown RBP eCLIP6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 HID1Q8IV36 788 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 MFSD2AQ8NA29 543 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 ASB11Q8WXH4 323 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 NOC4LQ9BVI4 516 aaKnown RBP6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 FOXQ1Q9C009 403 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 MAPK8IP1Q9UQF2 711 aa6.71□□□□□ -1.34
NSMCE4A-210ENST00000483541 PRAMEF27A3QJZ7 478 aa6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 GFRA2O00451 464 aa6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 PSMD2Q13200 908 aa6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 WIPI1Q5MNZ9 446 aaPredicted RBP6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 ANGEL2Q5VTE6 544 aaKnown RBP6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 TMC4Q7Z404 712 aa6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 ATG4DQ86TL0 474 aaPredicted RBP6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 PRDM5Q9NQX1 630 aaPredicted RBP6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 RNF19AQ9NV58 838 aa6.7□□□□□ -1.34
NSMCE4A-210ENST00000483541 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 ITIH2P19823 946 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 LIG3P49916 1009 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 CLCN7P51798 805 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 ETF1P62495 437 aaKnown RBP6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 XPCQ01831 940 aaPredicted RBP6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 TAF1CQ15572 869 aaPredicted RBP6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 NKPD1Q17RQ9 610 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 C22orf34Q6ZV56 151 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 SPACA3Q8IXA5 215 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 PI4K2BQ8TCG2 481 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 MIR1-1HGQ9H1L0 117 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 FBRSQ9HAH7 460 aa6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 MBNL3Q9NUK0 354 aaKnown RBP6.69□□□□□ -1.34
NSMCE4A-210ENST00000483541 SLITRK5O94991 958 aa6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 TSNAXIP1Q2TAA8 658 aa6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 DIEXFQ68CQ4 756 aaKnown RBP6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 ZNF746Q6NUN9 644 aaPredicted RBP6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 SLC23A3Q6PIS1 610 aa6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 CCDC84Q86UT8 332 aaPredicted RBP6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 PCDHB5Q9Y5E4 795 aa6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 USP31Q70CQ4 1352 aa6.68□□□□□ -1.34
NSMCE4A-210ENST00000483541 PAPLNO95428 1278 aa6.67□□□□□ -1.34
NSMCE4A-210ENST00000483541 CST3P01034 146 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms