RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 PJA1Q8NG27 643 aa6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 SARGQ9BW04 601 aa6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 OXCT2Q9BYC2 517 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 RSPH9Q9H1X1 276 aaPredicted RBP6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 OBP2AQ9NY56 170 aa6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 ZNRF3Q9ULT6 936 aa6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 PHLDB1Q86UU1 1377 aa6.31□□□□□ -1.4
R3HDM1-216ENST00000483065 F6X3S4 739 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 ZSCAN20P17040 1043 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 ARSDP51689 593 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 BIRC3Q13489 604 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 DHCR24Q15392 516 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 C4orf48Q5BLP8 95 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 PTCRAQ6ISU1 281 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 KANK3Q6NY19 840 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 AGMOQ6ZNB7 445 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 LRRTM3Q86VH5 581 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 TRIM42Q8IWZ5 723 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 SDR16C5Q8N3Y7 309 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 UBR7Q8N806 425 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 TRIM63Q969Q1 353 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 CDC6Q99741 560 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 NIFKQ9BYG3 293 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 FAM126AQ9BYI3 521 aaPredicted RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 NGRNQ9NPE2 291 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 NOB1Q9ULX3 412 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 NOL7Q9UMY1 257 aaKnown RBP6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 DAAM1Q9Y4D1 1078 aa6.3□□□□□ -1.4
R3HDM1-216ENST00000483065 PRRT4C9JH25 899 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 ERC2O15083 957 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 ADH1BP00325 375 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 VCAM1P19320 739 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 CRKP46108 304 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 MTMR1Q13613 665 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 SETDB1Q15047 1291 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 PUM3Q15397 648 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 FAM83BQ5T0W9 1011 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 CNNM4Q6P4Q7 775 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 MMS22LQ6ZRQ5 1243 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 NLRP8Q86W28 1048 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 IFNL2Q8IZJ0 200 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 JPH3Q8WXH2 748 aaPredicted RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 GATAD2BQ8WXI9 593 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 NEUROD6Q96NK8 337 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 STRBPQ96SI9 672 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 TRIM56Q9BRZ2 755 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 MRPL4Q9BYD3 311 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 MIR1-1HGQ9H1L0 117 aa6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 NCOA5Q9HCD5 579 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 LUC7L2Q9Y383 392 aaKnown RBP6.29□□□□□ -1.4
R3HDM1-216ENST00000483065 GPR39O43194 453 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 EYA4O95677 639 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 FAM153BP0C7A2 387 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 NAT2P11245 290 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 POLD1P28340 1107 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 FLT3P36888 993 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 MAP3K10Q02779 954 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 SAFBQ15424 915 aaKnown RBP eCLIP6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 HYIQ5T013 277 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 ERAP2Q6P179 960 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 FCHSD1Q86WN1 690 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 ACRBPQ8NEB7 543 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 RHPN1Q8TCX5 695 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 SKA1Q96BD8 255 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 CDK5RAP3Q96JB5 506 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 GPR101Q96P66 508 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 TM9SF2Q99805 663 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 ESYT1Q9BSJ8 1104 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 YIPF4Q9BSR8 244 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 PTPRHQ9HD43 1115 aa6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 PNMA8BQ9ULN7 279 aaPredicted RBP6.28□□□□□ -1.4
R3HDM1-216ENST00000483065 TMEM238LA0A1B0GVL6 79 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 BICDL2A1A5D9 508 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 VSTM5A8MXK1 200 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 KHNYNO15037 678 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 FBXO21O94952 628 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 RAPGEF3O95398 923 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 POLR3DP05423 398 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 SMPD1P17405 629 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 CES1P23141 567 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 CCND1P24385 295 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 GEMIN4P57678 1058 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 FAPQ12884 760 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 MLECQ14165 292 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 KRTAP5-3Q6L8H2 238 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 C6orf15Q6UXA7 325 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 FAM43BQ6ZT52 329 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 TOGARAM2Q6ZUX3 1019 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 LSRQ86X29 649 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 LEO1Q8WVC0 666 aaPredicted RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 CNKSR1Q969H4 720 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 TTC1Q99614 292 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 TARS2Q9BW92 718 aaKnown RBP6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 TNKS2Q9H2K2 1166 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 IFT122Q9HBG6 1241 aa6.27□□□□□ -1.41
R3HDM1-216ENST00000483065 C11orf16Q9NQ32 467 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms