RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 ZKSCAN4Q969J2 545 aaPredicted RBP10.57□□□□□ -0.72
SNX4-205ENST00000482965 EVI5LQ96CN4 794 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 OPTNQ96CV9 577 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.57□□□□□ -0.72
SNX4-205ENST00000482965 PI4KBQ9UBF8 816 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 ZNF112Q9UJU3 913 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 PALD1Q9ULE6 856 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 DOCK1Q14185 1865 aa10.57□□□□□ -0.72
SNX4-205ENST00000482965 ATAD5Q96QE3 1844 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 DDX60LQ5H9U9 1706 aaKnown RBP10.56□□□□□ -0.72
SNX4-205ENST00000482965 FAM196BA6NMK8 535 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 TRIM6-TRIM34B2RNG4 842 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 TBC1D12O60347 775 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 SLURP2P0DP57 97 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 ZBTB48P10074 688 aaPredicted RBP10.56□□□□□ -0.72
SNX4-205ENST00000482965 SLC4A8Q2Y0W8 1093 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
SNX4-205ENST00000482965 CRACR2BQ8N4Y2 399 aaPredicted RBP10.56□□□□□ -0.72
SNX4-205ENST00000482965 SDR42E1Q8WUS8 393 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 PUS7LQ9H0K6 701 aaKnown RBP10.56□□□□□ -0.72
SNX4-205ENST00000482965 WBP1LQ9NX94 342 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 HERC5Q9UII4 1024 aaKnown RBP10.56□□□□□ -0.72
SNX4-205ENST00000482965 SNCAIPQ9Y6H5 919 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 LAMB1P07942 1786 aa10.56□□□□□ -0.72
SNX4-205ENST00000482965 MYH8P13535 1937 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 MANSC4A6NHS7 340 aaPredicted RBP10.55□□□□□ -0.72
SNX4-205ENST00000482965 SPDYE5A6NIY4 337 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 PHF20L1A8MW92 1017 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 PRKAB2O43741 272 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 POLR3DP05423 398 aaPredicted RBP10.55□□□□□ -0.72
SNX4-205ENST00000482965 PDE4AP27815 886 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 GJA5P36382 358 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 NOL9Q5SY16 702 aaKnown RBP10.55□□□□□ -0.72
SNX4-205ENST00000482965 TTC6Q86TZ1 520 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 ERO1BQ86YB8 467 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 FOXP4Q8IVH2 680 aaPredicted RBP10.55□□□□□ -0.72
SNX4-205ENST00000482965 OSBP2Q969R2 916 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 RILPL2Q969X0 211 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 OTUD5Q96G74 571 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 DDRGK1Q96HY6 314 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 OSBPL3Q9H4L5 887 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 MCM9Q9NXL9 1143 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 SLC4A4Q9Y6R1 1079 aa10.55□□□□□ -0.72
SNX4-205ENST00000482965 FOXN1O15353 648 aa10.54□□□□□ -0.72
SNX4-205ENST00000482965 CTNND1O60716 968 aaKnown RBP10.54□□□□□ -0.72
SNX4-205ENST00000482965 CENPQQ7L2Z9 268 aaPredicted RBP10.54□□□□□ -0.72
SNX4-205ENST00000482965 SCYL3Q8IZE3 742 aa10.54□□□□□ -0.72
SNX4-205ENST00000482965 DCP1AQ9NPI6 582 aaPredicted RBP10.54□□□□□ -0.72
SNX4-205ENST00000482965 PICK1Q9NRD5 415 aa10.54□□□□□ -0.72
SNX4-205ENST00000482965 ATP8A2Q9NTI2 1148 aa10.54□□□□□ -0.72
SNX4-205ENST00000482965 M0R2C6 588 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 GPAA1O43292 621 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 CA12O43570 354 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 CTCFP49711 727 aaPredicted RBP10.53□□□□□ -0.72
SNX4-205ENST00000482965 PPATQ06203 517 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 PPIL2Q13356 520 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 ZMYM1Q5SVZ6 1142 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 AMOTL1Q8IY63 956 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 STRBPQ96SI9 672 aaKnown RBP10.53□□□□□ -0.72
SNX4-205ENST00000482965 EHD4Q9H223 541 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 SERPINB13Q9UIV8 391 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 PHIPQ8WWQ0 1821 aa10.53□□□□□ -0.72
SNX4-205ENST00000482965 CYP2D6P10635 497 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 GNAT2P19087 354 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 CAP2P40123 477 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 TM4SF4P48230 202 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 PLCD1P51178 756 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 GTF2A2P52657 109 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 INHBEP58166 350 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 SNAPC2Q13487 334 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 METTL16Q86W50 562 aaKnown RBP10.52□□□□□ -0.73
SNX4-205ENST00000482965 SEC62Q99442 399 aaKnown RBP10.52□□□□□ -0.73
SNX4-205ENST00000482965 DNAJC18Q9H819 358 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 RNF186Q9NXI6 227 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 TSKSQ9UJT2 592 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 SSUH2Q9Y2M2 353 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 PTPRFP10586 1907 aa10.52□□□□□ -0.73
SNX4-205ENST00000482965 CCL15-CCL14A0A0B4J2E2 113 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 USP17L12C9JPN9 530 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 USP17L21D6R901 530 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 IRF6O14896 467 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 TRPA1O75762 1119 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 GDF11O95390 407 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 APPP05067 770 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 HSPA8P11142 646 aaKnown RBP10.51□□□□□ -0.73
SNX4-205ENST00000482965 PTPRAP18433 802 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 RRP1BQ14684 758 aaKnown RBP10.51□□□□□ -0.73
SNX4-205ENST00000482965 CCL15Q16663 113 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 TTC22Q5TAA0 569 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 OTUD7BQ6GQQ9 843 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 TICAM2Q86XR7 235 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 HELLSQ9NRZ9 838 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 SAGE1Q9NXZ1 904 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 ZHX2Q9Y6X8 837 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 CASP8AP2Q9UKL3 1982 aa10.51□□□□□ -0.73
SNX4-205ENST00000482965 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms