RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 SAP30BPQ9UHR5 308 aaKnown RBP28.56■■■□□ 2.16
RHBDF1-208ENST00000482904 CXCL11O14625 94 aa28.55■■■□□ 2.16
RHBDF1-208ENST00000482904 SLC9C2Q5TAH2 1124 aa28.55■■■□□ 2.16
RHBDF1-208ENST00000482904 ANKRD23Q86SG2 305 aa28.55■■■□□ 2.16
RHBDF1-208ENST00000482904 BOLA2Q9H3K6 86 aa28.55■■■□□ 2.16
RHBDF1-208ENST00000482904 HPS5Q9UPZ3 1129 aa28.55■■■□□ 2.16
RHBDF1-208ENST00000482904 HLA-DOAP06340 250 aa28.54■■■□□ 2.16
RHBDF1-208ENST00000482904 FBXO46Q6PJ61 603 aaPredicted RBP28.54■■■□□ 2.16
RHBDF1-208ENST00000482904 PAG1Q9NWQ8 432 aa28.54■■■□□ 2.16
RHBDF1-208ENST00000482904 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.54■■■□□ 2.16
RHBDF1-208ENST00000482904 PALD1Q9ULE6 856 aa28.54■■■□□ 2.16
RHBDF1-208ENST00000482904 TRIM75PA6NK02 468 aa28.53■■■□□ 2.16
RHBDF1-208ENST00000482904 PDHXO00330 501 aa28.53■■■□□ 2.16
RHBDF1-208ENST00000482904 PDE6AP16499 860 aa28.53■■■□□ 2.16
RHBDF1-208ENST00000482904 ATP5JP18859 108 aa28.53■■■□□ 2.16
RHBDF1-208ENST00000482904 SLC4A8Q2Y0W8 1093 aa28.53■■■□□ 2.16
RHBDF1-208ENST00000482904 OTOP1Q7RTM1 612 aa28.53■■■□□ 2.16
RHBDF1-208ENST00000482904 TLR2O60603 784 aa28.52■■■□□ 2.16
RHBDF1-208ENST00000482904 GADL1Q6ZQY3 521 aa28.52■■■□□ 2.16
RHBDF1-208ENST00000482904 CCDC84Q86UT8 332 aaPredicted RBP28.52■■■□□ 2.16
RHBDF1-208ENST00000482904 EDC3Q96F86 508 aaKnown RBP28.52■■■□□ 2.16
RHBDF1-208ENST00000482904 AFG3L2Q9Y4W6 797 aa28.52■■■□□ 2.16
RHBDF1-208ENST00000482904 FOCADQ5VW36 1801 aa28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 A0A0G2JLL6 359 aaPredicted RBP28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 MAGEB6P1A0A0J9YX57 407 aa28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 FASTKD5Q7L8L6 764 aaKnown RBP28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 PRRT2Q7Z6L0 340 aaPredicted RBP28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 DCTPP1Q9H773 170 aa28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 EFCC1Q9HA90 598 aa28.51■■■□□ 2.15
RHBDF1-208ENST00000482904 ZNF532Q9HCE3 1301 aa28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 CAP2P40123 477 aa28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 ARHGEF6Q15052 776 aa28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 GPATCH3Q96I76 525 aa28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 PARK7Q99497 189 aaKnown RBP28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 HAUS7Q99871 368 aa28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.5■■■□□ 2.15
RHBDF1-208ENST00000482904 CDK5RAP2Q96SN8 1893 aa28.49■■■□□ 2.15
RHBDF1-208ENST00000482904 MOGSQ13724 837 aa28.49■■■□□ 2.15
RHBDF1-208ENST00000482904 FOXP4Q8IVH2 680 aaPredicted RBP28.49■■■□□ 2.15
RHBDF1-208ENST00000482904 CRBNQ96SW2 442 aa28.49■■■□□ 2.15
RHBDF1-208ENST00000482904 KIF22Q14807 665 aa28.48■■■□□ 2.15
RHBDF1-208ENST00000482904 RIOK1Q9BRS2 568 aaKnown RBP28.48■■■□□ 2.15
RHBDF1-208ENST00000482904 CRNKL1Q9BZJ0 848 aaKnown RBP28.48■■■□□ 2.15
RHBDF1-208ENST00000482904 PCDHB15Q9Y5E8 787 aa28.48■■■□□ 2.15
RHBDF1-208ENST00000482904 SIPA1L1O43166 1804 aa28.48■■■□□ 2.15
RHBDF1-208ENST00000482904 TBC1D2Q9BYX2 928 aa28.47■■■□□ 2.15
RHBDF1-208ENST00000482904 DNAJC18Q9H819 358 aa28.47■■■□□ 2.15
RHBDF1-208ENST00000482904 ECHDC1Q9NTX5 307 aa28.47■■■□□ 2.15
RHBDF1-208ENST00000482904 CPA4Q9UI42 421 aa28.47■■■□□ 2.15
RHBDF1-208ENST00000482904 SOX10P56693 466 aa28.46■■■□□ 2.15
RHBDF1-208ENST00000482904 RRP1BQ14684 758 aaKnown RBP28.46■■■□□ 2.15
RHBDF1-208ENST00000482904 GPAT2Q6NUI2 795 aa28.46■■■□□ 2.15
RHBDF1-208ENST00000482904 AS3MTQ9HBK9 375 aa28.46■■■□□ 2.15
RHBDF1-208ENST00000482904 USP17L5A8MUK1 530 aa28.45■■■□□ 2.14
RHBDF1-208ENST00000482904 GDF11O95390 407 aa28.45■■■□□ 2.14
RHBDF1-208ENST00000482904 ZNF280CQ8ND82 737 aa28.45■■■□□ 2.14
RHBDF1-208ENST00000482904 TCRBV5S4A2TA0A5A2 114 aa28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 ASNSP08243 561 aa28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 CYP2C8P10632 490 aa28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 LACTBP83111 547 aaPredicted RBP28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 SPP2Q13103 211 aa28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 TTC6Q86TZ1 520 aa28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 METTL16Q86W50 562 aaKnown RBP28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 PTPN22Q9Y2R2 807 aa28.44■■■□□ 2.14
RHBDF1-208ENST00000482904 ATAD5Q96QE3 1844 aa28.43■■■□□ 2.14
RHBDF1-208ENST00000482904 ADD2P35612 726 aa28.43■■■□□ 2.14
RHBDF1-208ENST00000482904 LCORLQ8N3X6 602 aa28.43■■■□□ 2.14
RHBDF1-208ENST00000482904 SERPINB13Q9UIV8 391 aa28.43■■■□□ 2.14
RHBDF1-208ENST00000482904 PHIPQ8WWQ0 1821 aa28.43■■■□□ 2.14
RHBDF1-208ENST00000482904 ECM2O94769 699 aaPredicted RBP28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 POLR3DP05423 398 aaPredicted RBP28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 ZSCAN25Q6NSZ9 544 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 C17orf99Q6UX52 265 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 SMCR8Q8TEV9 937 aaPredicted RBP28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 EHD4Q9H223 541 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 AGTPBP1Q9UPW5 1226 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 SLC45A1Q9Y2W3 748 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 NAV1Q8NEY1 1877 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 ADGRA2Q96PE1 1338 aa28.42■■■□□ 2.14
RHBDF1-208ENST00000482904 MBD4O95243 580 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 HMGCS2P54868 508 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 CAP1Q01518 475 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 TSHZ3Q63HK5 1081 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 PROCA1Q8NCQ7 364 aaPredicted RBP28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 ARHGAP39Q9C0H5 1083 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 ARMT1Q9H993 441 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 ZBTB47Q9UFB7 747 aaPredicted RBP28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 ZBTB21Q9ULJ3 1066 aa28.41■■■□□ 2.14
RHBDF1-208ENST00000482904 MYH1P12882 1939 aa28.4■■■□□ 2.14
RHBDF1-208ENST00000482904 SDR42E1Q8WUS8 393 aa28.4■■■□□ 2.14
RHBDF1-208ENST00000482904 GINM1Q9NU53 330 aa28.4■■■□□ 2.14
RHBDF1-208ENST00000482904 MCM9Q9NXL9 1143 aa28.4■■■□□ 2.14
RHBDF1-208ENST00000482904 DDX60LQ5H9U9 1706 aaKnown RBP28.4■■■□□ 2.14
RHBDF1-208ENST00000482904 SLFNL1Q499Z3 407 aa28.39■■■□□ 2.14
RHBDF1-208ENST00000482904 TREML2Q5T2D2 321 aa28.39■■■□□ 2.14
RHBDF1-208ENST00000482904 PNMA3Q9UL41 463 aa28.39■■■□□ 2.14
RHBDF1-208ENST00000482904 PTPRFP10586 1907 aa28.39■■■□□ 2.13
RHBDF1-208ENST00000482904 MLLT1Q03111 559 aaPredicted RBP28.38■■■□□ 2.13
RHBDF1-208ENST00000482904 MTMR2Q13614 643 aa28.38■■■□□ 2.13
RHBDF1-208ENST00000482904 SHROOM1Q2M3G4 852 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms