RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 IGKV5-2P06315 115 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 AARSP49588 968 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPGR-208ENST00000482855 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
RPGR-208ENST00000482855 NR1I3Q14994 352 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 WDR93Q6P2C0 686 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 RIC3Q7Z5B4 369 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 TRMT44Q8IYL2 757 aaKnown RBP12.56□□□□□ -0.4
RPGR-208ENST00000482855 SMARCC1Q92922 1105 aaPredicted RBP12.56□□□□□ -0.4
RPGR-208ENST00000482855 CLIC6Q96NY7 704 aa12.56□□□□□ -0.4
RPGR-208ENST00000482855 ZMYM1Q5SVZ6 1142 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 RASGRP2Q7LDG7 609 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 RAB11FIP4Q86YS3 637 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 MLKLQ8NB16 471 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 TEX13AQ9BXU3 409 aaPredicted RBP12.55□□□□□ -0.4
RPGR-208ENST00000482855 MAN1B1Q9UKM7 699 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 CAMTA1Q9Y6Y1 1673 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 SYF2O95926 243 aaKnown RBP12.55□□□□□ -0.4
RPGR-208ENST00000482855 TFRCP02786 760 aaKnown RBP12.55□□□□□ -0.4
RPGR-208ENST00000482855 PSEN1P49768 467 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 PTPAQ15257 358 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 MPRIPQ6WCQ1 1025 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 VPS37DQ86XT2 251 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 NOA1Q8NC60 698 aaKnown RBP12.55□□□□□ -0.4
RPGR-208ENST00000482855 CCDC148Q8NFR7 591 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 PAG1Q9NWQ8 432 aa12.55□□□□□ -0.4
RPGR-208ENST00000482855 TTF2Q9UNY4 1162 aaKnown RBP12.55□□□□□ -0.4
RPGR-208ENST00000482855 A0A1B0GTH6 734 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 SOCS7O14512 581 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 FOXN1O15353 648 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
RPGR-208ENST00000482855 PTPN12Q05209 780 aaKnown RBP12.54□□□□□ -0.4
RPGR-208ENST00000482855 MAP9Q49MG5 647 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 IGSF22Q8N9C0 903 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 CPLX3Q8WVH0 158 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 CDC5LQ99459 802 aaKnown RBP12.54□□□□□ -0.4
RPGR-208ENST00000482855 SAMSN1Q9NSI8 373 aaKnown RBP12.54□□□□□ -0.4
RPGR-208ENST00000482855 HPS5Q9UPZ3 1129 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 NEURL1BA8MQ27 555 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 PRC1O43663 620 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 RBL2Q08999 1139 aa12.54□□□□□ -0.4
RPGR-208ENST00000482855 ZNF530Q6P9A1 599 aaPredicted RBP12.54□□□□□ -0.4
RPGR-208ENST00000482855 MYH8P13535 1937 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 MAST3O60307 1309 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 MCM3P25205 808 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 USP8P40818 1118 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 GSCP56915 257 aaPredicted RBP12.53□□□□□ -0.4
RPGR-208ENST00000482855 AKAP17AQ02040 695 aaKnown RBP12.53□□□□□ -0.4
RPGR-208ENST00000482855 GCKRQ14397 625 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 POSTNQ15063 836 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 AKAP4Q5JQC9 854 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 TTC39AQ5SRH9 613 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 DDX21Q9NR30 783 aaKnown RBP eCLIP12.53□□□□□ -0.4
RPGR-208ENST00000482855 TAOK2Q9UL54 1235 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 RFX5P48382 616 aaPredicted RBP12.53□□□□□ -0.4
RPGR-208ENST00000482855 LIG3P49916 1009 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 MNAT1P51948 309 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 ZNF827Q17R98 1081 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 ELOA2Q8IYF1 753 aaPredicted RBP12.53□□□□□ -0.4
RPGR-208ENST00000482855 ANKRD20A12PQ8NF67 263 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 ALG1Q9BT22 464 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 CXorf56Q9H5V9 222 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 LTN1O94822 1766 aa12.53□□□□□ -0.4
RPGR-208ENST00000482855 EXOC5O00471 708 aa12.52□□□□□ -0.4
RPGR-208ENST00000482855 EBAG9O00559 213 aa12.52□□□□□ -0.4
RPGR-208ENST00000482855 MDM2Q00987 491 aaPredicted RBP12.52□□□□□ -0.4
RPGR-208ENST00000482855 MAP3K14Q99558 947 aa12.52□□□□□ -0.4
RPGR-208ENST00000482855 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.52□□□□□ -0.4
RPGR-208ENST00000482855 MYO1AQ9UBC5 1043 aa12.52□□□□□ -0.4
RPGR-208ENST00000482855 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.4
RPGR-208ENST00000482855 MYO6Q9UM54 1294 aa12.52□□□□□ -0.4
RPGR-208ENST00000482855 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 TEX33O43247 280 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 MFAP3LO75121 409 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 MAP2K2P36507 400 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 HAND2P61296 217 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 KRT40Q6A162 431 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 C4AP0C0L4 1744 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 C4BP0C0L5 1744 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 CCT5P48643 541 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 MORC3Q14149 939 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 IMMTQ16891 758 aaKnown RBP12.52□□□□□ -0.41
RPGR-208ENST00000482855 NCAPH2Q6IBW4 605 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 CNGA4Q8IV77 575 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 TRIML1Q8N9V2 468 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 ACRBPQ8NEB7 543 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 KAT2BQ92831 832 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 AIFM3Q96NN9 605 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 MYD88Q99836 296 aa12.52□□□□□ -0.41
RPGR-208ENST00000482855 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
RPGR-208ENST00000482855 ONECUT3O60422 494 aaPredicted RBP12.51□□□□□ -0.41
RPGR-208ENST00000482855 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
RPGR-208ENST00000482855 APPP05067 770 aa12.51□□□□□ -0.41
RPGR-208ENST00000482855 CCDC172P0C7W6 258 aa12.51□□□□□ -0.41
RPGR-208ENST00000482855 PLCD1P51178 756 aa12.51□□□□□ -0.41
RPGR-208ENST00000482855 STIM1Q13586 685 aa12.51□□□□□ -0.41
RPGR-208ENST00000482855 NT5DC1Q5TFE4 455 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms