RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 FOCADQ5VW36 1801 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 MINDY4BA8MYZ0 360 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 PPARAQ07869 468 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 PRAMEF18Q5VWM3 479 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 CRACR2BQ8N4Y2 399 aaPredicted RBP18.25■□□□□ 0.51
CCM2-215ENST00000482714 TRIM34Q9BYJ4 488 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 ZNF341Q9BYN7 854 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 GINM1Q9NU53 330 aa18.25■□□□□ 0.51
CCM2-215ENST00000482714 FGRP09769 529 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 HSPA6P17066 643 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 PDE4BQ07343 736 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 NECTIN1Q15223 517 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 C8orf34Q49A92 452 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 RNF20Q5VTR2 975 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 TATDN1Q6P1N9 297 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 ARMC9Q7Z3E5 817 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 C2orf69Q8N8R5 385 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.24■□□□□ 0.51
CCM2-215ENST00000482714 ZNF112Q9UJU3 913 aa18.24■□□□□ 0.51
CCM2-215ENST00000482714 CDK5RAP2Q96SN8 1893 aa18.23■□□□□ 0.51
CCM2-215ENST00000482714 TRAF5O00463 557 aa18.23■□□□□ 0.51
CCM2-215ENST00000482714 USP2O75604 605 aaPredicted RBP18.23■□□□□ 0.51
CCM2-215ENST00000482714 C16orf86Q6ZW13 317 aa18.23■□□□□ 0.51
CCM2-215ENST00000482714 CCDC17Q96LX7 622 aa18.23■□□□□ 0.51
CCM2-215ENST00000482714 RNF41Q9H4P4 317 aaPredicted RBP18.23■□□□□ 0.51
CCM2-215ENST00000482714 MYH1P12882 1939 aa18.22■□□□□ 0.51
CCM2-215ENST00000482714 CELF2O95319 508 aaKnown RBP18.22■□□□□ 0.51
CCM2-215ENST00000482714 IREB2P48200 963 aaKnown RBP18.22■□□□□ 0.51
CCM2-215ENST00000482714 TSGA10IPQ3SY00 556 aa18.22■□□□□ 0.51
CCM2-215ENST00000482714 KLRG1Q96E93 195 aa18.22■□□□□ 0.51
CCM2-215ENST00000482714 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
CCM2-215ENST00000482714 RBM8AQ9Y5S9 174 aaKnown RBP18.22■□□□□ 0.51
CCM2-215ENST00000482714 ROBO3Q96MS0 1386 aa18.22■□□□□ 0.51
CCM2-215ENST00000482714 MAP3K9P80192 1104 aa18.21■□□□□ 0.51
CCM2-215ENST00000482714 CST9Q5W186 159 aa18.21■□□□□ 0.51
CCM2-215ENST00000482714 MIGA2Q7L4E1 593 aa18.21■□□□□ 0.51
CCM2-215ENST00000482714 MKNK2Q9HBH9 465 aa18.21■□□□□ 0.51
CCM2-215ENST00000482714 GBA2Q9HCG7 927 aaPredicted RBP18.21■□□□□ 0.51
CCM2-215ENST00000482714 PHF20L1A8MW92 1017 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 CTNND1O60716 968 aaKnown RBP18.2■□□□□ 0.5
CCM2-215ENST00000482714 CYP2D6P10635 497 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 ZKSCAN1P17029 563 aaPredicted RBP18.2■□□□□ 0.5
CCM2-215ENST00000482714 CDK8P49336 464 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 DLK2Q6UY11 383 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 MFSD6Q6ZSS7 791 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 CDAN1Q8IWY9 1227 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 ZNF444Q8N0Y2 327 aaPredicted RBP18.2■□□□□ 0.5
CCM2-215ENST00000482714 STAG1Q8WVM7 1258 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 KCNB2Q92953 911 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 CYP2D7A0A087X1C5 515 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 ORC4O43929 436 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 CYP21A2P08686 494 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 MCCP23508 829 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 HSPA4P34932 840 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 LDLRAD1Q5T700 205 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 ANKRD13AQ8IZ07 590 aa18.2■□□□□ 0.5
CCM2-215ENST00000482714 TMEM88BA6NKF7 163 aa18.19■□□□□ 0.5
CCM2-215ENST00000482714 CERKLQ49MI3 558 aaPredicted RBP18.19■□□□□ 0.5
CCM2-215ENST00000482714 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
CCM2-215ENST00000482714 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.19■□□□□ 0.5
CCM2-215ENST00000482714 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
CCM2-215ENST00000482714 ANGEL1Q9UNK9 670 aaKnown RBP18.19■□□□□ 0.5
CCM2-215ENST00000482714 BAZ2AQ9UIF9 1905 aaKnown RBP18.18■□□□□ 0.5
CCM2-215ENST00000482714 SHMT1P34896 483 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 CAP2P40123 477 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 TTLL12Q14166 644 aaPredicted RBP18.18■□□□□ 0.5
CCM2-215ENST00000482714 KRT32Q14532 448 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 NOL9Q5SY16 702 aaKnown RBP18.18■□□□□ 0.5
CCM2-215ENST00000482714 DYNLL2Q96FJ2 89 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 HHIPL1Q96JK4 782 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 BACH2Q9BYV9 841 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 KRT23Q9C075 422 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 DNAJC18Q9H819 358 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 ZNF408Q9H9D4 720 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 CABP5Q9NP86 173 aa18.18■□□□□ 0.5
CCM2-215ENST00000482714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCM2-215ENST00000482714 SLC27A2O14975 620 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 ASNSP08243 561 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 APLP1P51693 650 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCM2-215ENST00000482714 TRDNQ13061 729 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 TBC1D2Q9BYX2 928 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 UPF2Q9HAU5 1272 aaKnown RBP18.17■□□□□ 0.5
CCM2-215ENST00000482714 CSADQ9Y600 493 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 NAV1Q8NEY1 1877 aa18.17■□□□□ 0.5
CCM2-215ENST00000482714 HAND2P61296 217 aa18.16■□□□□ 0.5
CCM2-215ENST00000482714 CTDSPL2Q05D32 466 aa18.16■□□□□ 0.5
CCM2-215ENST00000482714 SLC4A8Q2Y0W8 1093 aa18.16■□□□□ 0.5
CCM2-215ENST00000482714 PPP4R3BQ5MIZ7 849 aa18.16■□□□□ 0.5
CCM2-215ENST00000482714 WRNIP1Q96S55 665 aa18.16■□□□□ 0.5
CCM2-215ENST00000482714 SSC5DA1L4H1 1573 aa18.16■□□□□ 0.5
CCM2-215ENST00000482714 DDX60LQ5H9U9 1706 aaKnown RBP18.16■□□□□ 0.5
CCM2-215ENST00000482714 SEC24BO95487 1268 aa18.15■□□□□ 0.5
CCM2-215ENST00000482714 ANAPC15P60006 121 aa18.15■□□□□ 0.5
CCM2-215ENST00000482714 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.15■□□□□ 0.5
CCM2-215ENST00000482714 SAPCD2Q86UD0 394 aa18.15■□□□□ 0.5
CCM2-215ENST00000482714 SCYL3Q8IZE3 742 aa18.15■□□□□ 0.5
CCM2-215ENST00000482714 ESR2Q92731 530 aa18.15■□□□□ 0.5
CCM2-215ENST00000482714 CREBZFQ9NS37 354 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms