RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
COL16A1-212ENST00000482478 CTNND1O60716 968 aaKnown RBP19.06■□□□□ 0.64
COL16A1-212ENST00000482478 HLA-DOAP06340 250 aa19.06■□□□□ 0.64
COL16A1-212ENST00000482478 USP5P45974 858 aa19.06■□□□□ 0.64
COL16A1-212ENST00000482478 GADL1Q6ZQY3 521 aa19.06■□□□□ 0.64
COL16A1-212ENST00000482478 OTOP1Q7RTM1 612 aa19.06■□□□□ 0.64
COL16A1-212ENST00000482478 ANKRD23Q86SG2 305 aa19.06■□□□□ 0.64
COL16A1-212ENST00000482478 PARK7Q99497 189 aaKnown RBP19.06■□□□□ 0.64
COL16A1-212ENST00000482478 DHX36Q9H2U1 1008 aaKnown RBP19.06■□□□□ 0.64
COL16A1-212ENST00000482478 PDHXO00330 501 aa19.05■□□□□ 0.64
COL16A1-212ENST00000482478 TBC1D12O60347 775 aa19.05■□□□□ 0.64
COL16A1-212ENST00000482478 PPP4CP60510 307 aa19.05■□□□□ 0.64
COL16A1-212ENST00000482478 CCDC84Q86UT8 332 aaPredicted RBP19.05■□□□□ 0.64
COL16A1-212ENST00000482478 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.05■□□□□ 0.64
COL16A1-212ENST00000482478 EFCC1Q9HA90 598 aa19.05■□□□□ 0.64
COL16A1-212ENST00000482478 HERC5Q9UII4 1024 aaKnown RBP19.05■□□□□ 0.64
COL16A1-212ENST00000482478 DDX60LQ5H9U9 1706 aaKnown RBP19.05■□□□□ 0.64
COL16A1-212ENST00000482478 A0A0G2JLL6 359 aaPredicted RBP19.04■□□□□ 0.64
COL16A1-212ENST00000482478 PRRT2Q7Z6L0 340 aaPredicted RBP19.04■□□□□ 0.64
COL16A1-212ENST00000482478 PI4KBQ9UBF8 816 aa19.04■□□□□ 0.64
COL16A1-212ENST00000482478 PHIPQ8WWQ0 1821 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 CXCL11O14625 94 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 SMARCA5O60264 1052 aaPredicted RBP19.03■□□□□ 0.64
COL16A1-212ENST00000482478 TLR2O60603 784 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 ECM2O94769 699 aaPredicted RBP19.03■□□□□ 0.64
COL16A1-212ENST00000482478 PDE6AP16499 860 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 MAP3K10Q02779 954 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 KIF22Q14807 665 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 TMED8Q6PL24 325 aaPredicted RBP19.03■□□□□ 0.64
COL16A1-212ENST00000482478 BOLA2Q9H3K6 86 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 PAG1Q9NWQ8 432 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 PALD1Q9ULE6 856 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 PTPRFP10586 1907 aa19.03■□□□□ 0.64
COL16A1-212ENST00000482478 ZSWIM8A7E2V4 1837 aa19.02■□□□□ 0.64
COL16A1-212ENST00000482478 MAGEB6P1A0A0J9YX57 407 aa19.02■□□□□ 0.64
COL16A1-212ENST00000482478 ARHGEF6Q15052 776 aa19.02■□□□□ 0.64
COL16A1-212ENST00000482478 SLC9C2Q5TAH2 1124 aa19.02■□□□□ 0.64
COL16A1-212ENST00000482478 FASTKD5Q7L8L6 764 aaKnown RBP19.02■□□□□ 0.64
COL16A1-212ENST00000482478 EDC3Q96F86 508 aaKnown RBP19.02■□□□□ 0.64
COL16A1-212ENST00000482478 GPATCH3Q96I76 525 aa19.02■□□□□ 0.64
COL16A1-212ENST00000482478 CPA4Q9UI42 421 aa19.02■□□□□ 0.64
COL16A1-212ENST00000482478 ZNF532Q9HCE3 1301 aa19.01■□□□□ 0.63
COL16A1-212ENST00000482478 LOC285556D6RIA3 1793 aa19.01■□□□□ 0.63
COL16A1-212ENST00000482478 GDF11O95390 407 aa19.01■□□□□ 0.63
COL16A1-212ENST00000482478 DNAJC18Q9H819 358 aa19.01■□□□□ 0.63
COL16A1-212ENST00000482478 AFG3L2Q9Y4W6 797 aa19.01■□□□□ 0.63
COL16A1-212ENST00000482478 MYH1P12882 1939 aa19■□□□□ 0.63
COL16A1-212ENST00000482478 CYP2C8P10632 490 aa19■□□□□ 0.63
COL16A1-212ENST00000482478 CAP2P40123 477 aa19■□□□□ 0.63
COL16A1-212ENST00000482478 MOGSQ13724 837 aa19■□□□□ 0.63
COL16A1-212ENST00000482478 SMCR8Q8TEV9 937 aaPredicted RBP19■□□□□ 0.63
COL16A1-212ENST00000482478 CRNKL1Q9BZJ0 848 aaKnown RBP19■□□□□ 0.63
COL16A1-212ENST00000482478 DDX24Q9GZR7 859 aaKnown RBP eCLIP19■□□□□ 0.63
COL16A1-212ENST00000482478 AS3MTQ9HBK9 375 aa19■□□□□ 0.63
COL16A1-212ENST00000482478 PTPN22Q9Y2R2 807 aa19■□□□□ 0.63
COL16A1-212ENST00000482478 ATP5JP18859 108 aa18.99■□□□□ 0.63
COL16A1-212ENST00000482478 LACTBP83111 547 aaPredicted RBP18.99■□□□□ 0.63
COL16A1-212ENST00000482478 MLLT1Q03111 559 aaPredicted RBP18.99■□□□□ 0.63
COL16A1-212ENST00000482478 ZNF280CQ8ND82 737 aa18.99■□□□□ 0.63
COL16A1-212ENST00000482478 TBC1D2Q9BYX2 928 aa18.99■□□□□ 0.63
COL16A1-212ENST00000482478 ARHGAP39Q9C0H5 1083 aa18.99■□□□□ 0.63
COL16A1-212ENST00000482478 ADGRA2Q96PE1 1338 aa18.99■□□□□ 0.63
COL16A1-212ENST00000482478 USP17L5A8MUK1 530 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 ASNSP08243 561 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 SPP2Q13103 211 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 GPAT2Q6NUI2 795 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 HAUS7Q99871 368 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 RIOK1Q9BRS2 568 aaKnown RBP18.98■□□□□ 0.63
COL16A1-212ENST00000482478 PNMA3Q9UL41 463 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 ZBTB21Q9ULJ3 1066 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 AGTPBP1Q9UPW5 1226 aa18.98■□□□□ 0.63
COL16A1-212ENST00000482478 HMGCS2P54868 508 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 CAP1Q01518 475 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 MTMR2Q13614 643 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 RRP1BQ14684 758 aaKnown RBP18.97■□□□□ 0.63
COL16A1-212ENST00000482478 TSHZ3Q63HK5 1081 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 LCORLQ8N3X6 602 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 CRBNQ96SW2 442 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 ECHDC1Q9NTX5 307 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 MYH7P12883 1935 aa18.97■□□□□ 0.63
COL16A1-212ENST00000482478 HTTP42858 3142 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 MBD4O95243 580 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 POLR3DP05423 398 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-212ENST00000482478 TREML2Q5T2D2 321 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 TTC6Q86TZ1 520 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 FOXP4Q8IVH2 680 aaPredicted RBP18.96■□□□□ 0.63
COL16A1-212ENST00000482478 SERPINB13Q9UIV8 391 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 SLC45A1Q9Y2W3 748 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 PTCH2Q9Y6C5 1203 aa18.96■□□□□ 0.63
COL16A1-212ENST00000482478 ADD2P35612 726 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 SHROOM1Q2M3G4 852 aaPredicted RBP18.95■□□□□ 0.62
COL16A1-212ENST00000482478 SLC9C1Q4G0N8 1177 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 C17orf99Q6UX52 265 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 PROCA1Q8NCQ7 364 aaPredicted RBP18.95■□□□□ 0.62
COL16A1-212ENST00000482478 SDR42E1Q8WUS8 393 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 FEZ1Q99689 392 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 EHD4Q9H223 541 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 DCTPP1Q9H773 170 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 ARMT1Q9H993 441 aa18.95■□□□□ 0.62
COL16A1-212ENST00000482478 MCM9Q9NXL9 1143 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms