RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CTAGE8P0CG41 777 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 ITGA6P23229 1130 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 CDC25AP30304 524 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 CASP14P31944 242 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 NAP1L1P55209 391 aaKnown RBP14.46□□□□□ -0.09
VPS52-218ENST00000482399 CTAGE6Q86UF2 777 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 CTAGE4Q8IX94 777 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.46□□□□□ -0.09
VPS52-218ENST00000482399 TAB2Q9NYJ8 693 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 ADAM21Q9UKJ8 722 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 WWC3Q9ULE0 1092 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 CTNND2Q9UQB3 1225 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 UTYO14607 1347 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 PRKAB2O43741 272 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 XBP1P17861 261 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 TRIM65Q6PJ69 517 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 EPSTI1Q96J88 318 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 SLC4A4Q9Y6R1 1079 aa14.46□□□□□ -0.09
VPS52-218ENST00000482399 PHKA1P46020 1223 aa14.46□□□□□ -0.1
VPS52-218ENST00000482399 KIAA1328Q86T90 577 aa14.46□□□□□ -0.1
VPS52-218ENST00000482399 SLC35F6Q8N357 371 aa14.46□□□□□ -0.1
VPS52-218ENST00000482399 NACAP1Q9BZK3 213 aa14.46□□□□□ -0.1
VPS52-218ENST00000482399 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.46□□□□□ -0.1
VPS52-218ENST00000482399 ZMYM6O95789 1325 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 ANKRD18BA2A2Z9 1011 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 RABL6Q3YEC7 729 aaPredicted RBP14.45□□□□□ -0.1
VPS52-218ENST00000482399 CSRNP2Q9H175 543 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 FAN1Q9Y2M0 1017 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 MCAMP43121 646 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 OXER1Q8TDS5 423 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 WASF1Q92558 559 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 PSMB7Q99436 277 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 ZSWIM5Q9P217 1185 aa14.45□□□□□ -0.1
VPS52-218ENST00000482399 STX10O60499 249 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 TBC1D8O95759 1140 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 TUBB4AP04350 444 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 MRPS25P82663 173 aaKnown RBP14.44□□□□□ -0.1
VPS52-218ENST00000482399 FAM205CA6NFA0 338 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 TRIM75PA6NK02 468 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 N4BP1O75113 896 aaKnown RBP14.44□□□□□ -0.1
VPS52-218ENST00000482399 IBSPP21815 317 aaPredicted RBP14.44□□□□□ -0.1
VPS52-218ENST00000482399 EIF5P55010 431 aaKnown RBP14.44□□□□□ -0.1
VPS52-218ENST00000482399 MAP3K12Q12852 859 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 RASSF4Q9H2L5 321 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 GREM2Q9H772 168 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 SYNRGQ9UMZ2 1314 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
VPS52-218ENST00000482399 H7C1W4 665 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 TXLNAP40222 546 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 MLKLQ8NB16 471 aa14.44□□□□□ -0.1
VPS52-218ENST00000482399 NEDD4P46934 1319 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 PDE6AP16499 860 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 NCAPH2Q6IBW4 605 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 PIH1D3Q9NQM4 214 aaKnown RBP14.43□□□□□ -0.1
VPS52-218ENST00000482399 V9GY48 417 aaPredicted RBP14.43□□□□□ -0.1
VPS52-218ENST00000482399 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 MCM7P33993 719 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 KRT9P35527 623 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 TC2NQ8N9U0 490 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 NKX2-3Q8TAU0 364 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 BRMS1Q9HCU9 246 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 ABCB6Q9NP58 842 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 JADE2Q9NQC1 790 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 MON2Q7Z3U7 1717 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 CCDC93Q567U6 631 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 RESP18Q5W5W9 173 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 HDXQ7Z353 690 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 DHX37Q8IY37 1157 aaKnown RBP14.43□□□□□ -0.1
VPS52-218ENST00000482399 RABGGTAQ92696 567 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 BPIFA3Q9BQP9 254 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 ACBD3Q9H3P7 528 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 TFR2Q9UP52 801 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 CEP131Q9UPN4 1083 aa14.43□□□□□ -0.1
VPS52-218ENST00000482399 SALL1Q9NSC2 1324 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 BAZ2BQ9UIF8 2168 aaKnown RBP14.42□□□□□ -0.1
VPS52-218ENST00000482399 SPATA31D1Q6ZQQ2 1576 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 SH2B2O14492 632 aaPredicted RBP14.42□□□□□ -0.1
VPS52-218ENST00000482399 UBXN1Q04323 297 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 DNAJC10Q8IXB1 793 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 SDR42E1Q8WUS8 393 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 CRACR2AQ9BSW2 395 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 ANKARQ7Z5J8 1434 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 ADGRL3Q9HAR2 1447 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 UBN2Q6ZU65 1347 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 BMP6P22004 513 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 ENOX2Q16206 610 aaKnown RBP14.42□□□□□ -0.1
VPS52-218ENST00000482399 CEP112Q8N8E3 955 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 ZCRB1Q8TBF4 217 aaKnown RBP14.42□□□□□ -0.1
VPS52-218ENST00000482399 JAG2Q9Y219 1238 aa14.42□□□□□ -0.1
VPS52-218ENST00000482399 FANCGO15287 622 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 PPP6R2O75170 966 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 NOM1Q5C9Z4 860 aaKnown RBP14.41□□□□□ -0.1
VPS52-218ENST00000482399 RAD9BQ6WBX8 426 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
VPS52-218ENST00000482399 INTS13Q9NVM9 706 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 TMOD3Q9NYL9 352 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 MRFAP1Q9Y605 127 aa14.41□□□□□ -0.1
VPS52-218ENST00000482399 RILPL1Q5EBL4 403 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms