RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 ECE2O60344 883 aa25.81■■□□□ 1.72
RUNX1-216ENST00000482318 MBD3O95983 291 aa25.81■■□□□ 1.72
RUNX1-216ENST00000482318 NCLP19338 710 aaKnown RBP25.81■■□□□ 1.72
RUNX1-216ENST00000482318 KIAA2012Q0VF49 1180 aa25.81■■□□□ 1.72
RUNX1-216ENST00000482318 CCDC93Q567U6 631 aa25.81■■□□□ 1.72
RUNX1-216ENST00000482318 CYP2D6P10635 497 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 RHBDL3P58872 404 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 PPP2R5BQ15173 497 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 SEC23AQ15436 765 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 RAB11FIP4Q86YS3 637 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 RTKN2Q8IZC4 609 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 ZNF287Q9HBT7 754 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 ORC3Q9UBD5 711 aaPredicted RBP25.8■■□□□ 1.72
RUNX1-216ENST00000482318 CCDC196A0A1B0GTZ2 297 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 SMIM22K7EJ46 135 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 PRDM1O75626 825 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 HHIPL2Q6UWX4 724 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 MAPKAPK5Q8IW41 473 aa25.8■■□□□ 1.72
RUNX1-216ENST00000482318 ZNF646O15015 1829 aaPredicted RBP25.79■■□□□ 1.72
RUNX1-216ENST00000482318 C21orf2O43822 256 aa25.79■■□□□ 1.72
RUNX1-216ENST00000482318 POLR3DP05423 398 aaPredicted RBP25.79■■□□□ 1.72
RUNX1-216ENST00000482318 FDPSP14324 419 aaKnown RBP25.79■■□□□ 1.72
RUNX1-216ENST00000482318 POLD1P28340 1107 aa25.79■■□□□ 1.72
RUNX1-216ENST00000482318 FERMT3Q86UX7 667 aa25.79■■□□□ 1.72
RUNX1-216ENST00000482318 CNPY2Q9Y2B0 182 aa25.79■■□□□ 1.72
RUNX1-216ENST00000482318 SCN9AQ15858 1988 aa25.79■■□□□ 1.72
RUNX1-216ENST00000482318 MYH15Q9Y2K3 1946 aa25.78■■□□□ 1.72
RUNX1-216ENST00000482318 FLT1P17948 1338 aa25.78■■□□□ 1.72
RUNX1-216ENST00000482318 KRT85P78386 507 aa25.78■■□□□ 1.72
RUNX1-216ENST00000482318 IFIT1BQ5T764 474 aaKnown RBP25.78■■□□□ 1.72
RUNX1-216ENST00000482318 ZNF654Q8IZM8 581 aa25.78■■□□□ 1.72
RUNX1-216ENST00000482318 ENAHQ8N8S7 591 aaPredicted RBP25.78■■□□□ 1.72
RUNX1-216ENST00000482318 TEKT1Q969V4 418 aa25.78■■□□□ 1.72
RUNX1-216ENST00000482318 MTFR1LQ9H019 292 aa25.78■■□□□ 1.72
RUNX1-216ENST00000482318 F8W031 263 aaPredicted RBP25.77■■□□□ 1.72
RUNX1-216ENST00000482318 DPEP1P16444 411 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 ADD1P35611 737 aaKnown RBP25.77■■□□□ 1.72
RUNX1-216ENST00000482318 DNM1Q05193 864 aaKnown RBP25.77■■□□□ 1.72
RUNX1-216ENST00000482318 AOC3Q16853 763 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 SOGA3Q5TF21 947 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 MRIQ9BWK5 157 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 GZF1Q9H116 711 aaPredicted RBP25.77■■□□□ 1.72
RUNX1-216ENST00000482318 PSME4Q14997 1843 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 ECM29Q5VYK3 1845 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 USP17L3A6NCW0 530 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 USP17L4A6NCW7 530 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 TSPY2A6NKD2 308 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 RXRAP19793 462 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 CDC27P30260 824 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 RTN1Q16799 776 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 CCDC178Q5BJE1 867 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 USP17L1Q7RTZ2 530 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 USP48Q86UV5 1035 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 PSMD1Q99460 953 aa25.77■■□□□ 1.72
RUNX1-216ENST00000482318 STK36Q9NRP7 1315 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 CALM1P0DP23 149 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 CALM2P0DP24 149 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 CALM3P0DP25 149 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 DEKP35659 375 aaKnown RBP25.76■■□□□ 1.71
RUNX1-216ENST00000482318 TGFB2P61812 414 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 RESTQ13127 1097 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 C8orf76Q96K31 380 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 MYL10Q9BUA6 226 aa25.76■■□□□ 1.71
RUNX1-216ENST00000482318 PPIP5K2O43314 1243 aa25.75■■□□□ 1.71
RUNX1-216ENST00000482318 IARSP41252 1262 aaKnown RBP25.75■■□□□ 1.71
RUNX1-216ENST00000482318 HDLBPQ00341 1268 aaKnown RBP25.75■■□□□ 1.71
RUNX1-216ENST00000482318 DACT2Q5SW24 774 aa25.75■■□□□ 1.71
RUNX1-216ENST00000482318 CATIPQ7Z7H3 387 aa25.75■■□□□ 1.71
RUNX1-216ENST00000482318 MKNK2Q9HBH9 465 aa25.75■■□□□ 1.71
RUNX1-216ENST00000482318 ZBTB7AO95365 584 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 IFNAR1P17181 557 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 KCNA3P22001 575 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 EVX2Q03828 476 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 NTRK3Q16288 839 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 CCDC144CPQ8IYA2 1237 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 GDPD2Q9HCC8 539 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 FAM217BQ9NTX9 383 aaPredicted RBP25.74■■□□□ 1.71
RUNX1-216ENST00000482318 FIBPO43427 364 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 FANCBQ8NB91 859 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 WASF1Q92558 559 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 MXD3Q9BW11 206 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 SCAND2PQ9GZW5 306 aaPredicted RBP25.74■■□□□ 1.71
RUNX1-216ENST00000482318 VPS33BQ9H267 617 aa25.74■■□□□ 1.71
RUNX1-216ENST00000482318 SAP30BPQ9UHR5 308 aaKnown RBP25.74■■□□□ 1.71
RUNX1-216ENST00000482318 DDAH1O94760 285 aa25.73■■□□□ 1.71
RUNX1-216ENST00000482318 FBXO18Q8NFZ0 1043 aa25.73■■□□□ 1.71
RUNX1-216ENST00000482318 GPT2Q8TD30 523 aa25.73■■□□□ 1.71
RUNX1-216ENST00000482318 ADAMTSL1Q8N6G6 1762 aa25.72■■□□□ 1.71
RUNX1-216ENST00000482318 PPFIA3O75145 1194 aa25.72■■□□□ 1.71
RUNX1-216ENST00000482318 SCNN1DP51172 638 aa25.72■■□□□ 1.71
RUNX1-216ENST00000482318 SSRP1Q08945 709 aaKnown RBP25.72■■□□□ 1.71
RUNX1-216ENST00000482318 SLC4A8Q2Y0W8 1093 aa25.72■■□□□ 1.71
RUNX1-216ENST00000482318 TRIM22Q8IYM9 498 aa25.72■■□□□ 1.71
RUNX1-216ENST00000482318 ZNF444Q8N0Y2 327 aaPredicted RBP25.72■■□□□ 1.71
RUNX1-216ENST00000482318 NUP133Q8WUM0 1156 aa25.72■■□□□ 1.71
RUNX1-216ENST00000482318 CRKP46108 304 aa25.71■■□□□ 1.71
RUNX1-216ENST00000482318 PLCD1P51178 756 aa25.71■■□□□ 1.71
RUNX1-216ENST00000482318 UBE2HP62256 183 aa25.71■■□□□ 1.71
RUNX1-216ENST00000482318 FAM47AQ5JRC9 791 aa25.71■■□□□ 1.71
RUNX1-216ENST00000482318 ATL3Q6DD88 541 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms